RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 SPIN3Q5JUX0 258 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 TMEM219Q86XT9 240 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 SYS1Q8N2H4 156 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 PQLC1Q8N2U9 271 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 MALSU1Q96EH3 234 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 Q96MT0 163 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 NEK6Q9HC98 313 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 TBL2Q9Y4P3 447 aaKnown RBP14.77□□□□□ -0.05
FXN-203ENST00000396366 HILPDAQ9Y5L2 63 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 LINC00312Q9Y6C7 94 aa14.77□□□□□ -0.05
FXN-203ENST00000396366 TET2Q6N021 2002 aaPredicted RBP14.76□□□□□ -0.05
FXN-203ENST00000396366 IGHV2-26A0A0B4J1V2 119 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 A0A0G2JK05 382 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 SH2D1BO14796 132 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 MGST3O14880 152 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 BAG2O95816 211 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 MT-ND2P03891 347 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 GLIPR1P48060 266 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 P2RX3P56373 397 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 AESQ08117 197 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 IL18R1Q13478 541 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 C10orf67Q8IYJ2 551 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 KLHDC1Q8N7A1 406 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 EXOSC4Q9NPD3 245 aaKnown RBP14.76□□□□□ -0.05
FXN-203ENST00000396366 ING3Q9NXR8 418 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 TCF19Q9Y242 345 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 SESN1Q9Y6P5 492 aa14.76□□□□□ -0.05
FXN-203ENST00000396366 A6NDX4 124 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 MPZL2O60487 215 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 WBP4O75554 376 aaKnown RBP14.75□□□□□ -0.05
FXN-203ENST00000396366 LIMS3P0CW19 117 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 LIMS4P0CW20 117 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 VSIG10L2P0DP72 767 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 GDNFP39905 211 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 ZP1P60852 638 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 RAB40BQ12829 278 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 HERPUD1Q15011 391 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 KISS1Q15726 138 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 PDLIM3Q53GG5 364 aaPredicted RBP14.75□□□□□ -0.05
FXN-203ENST00000396366 PRAMEF5Q5TYX0 476 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 Q6P435 159 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 TRAPPC6BQ86SZ2 158 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 OR5AK2Q8NH90 309 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 OR2T6Q8NHC8 308 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 MRPL48Q96GC5 212 aaKnown RBP14.75□□□□□ -0.05
FXN-203ENST00000396366 NPFFR1Q9GZQ6 430 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 TMEM133Q9H2Q1 129 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 ZNF702PQ9H963 129 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 RAB18Q9NP72 206 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 MRPS18AQ9NVS2 196 aaKnown RBP14.75□□□□□ -0.05
FXN-203ENST00000396366 GLS2Q9UI32 602 aa14.75□□□□□ -0.05
FXN-203ENST00000396366 RPL36Q9Y3U8 105 aaKnown RBP14.75□□□□□ -0.05
FXN-203ENST00000396366 FAM172BPA6NC97 362 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 EBAG9O00559 213 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 HCKP08631 526 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 TMEM225BP0DP42 221 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 LMO1P25800 156 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 ERP29P30040 261 aaKnown RBP14.74□□□□□ -0.05
FXN-203ENST00000396366 CDK5R1Q15078 307 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 UTF1Q5T230 341 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 LPCAT4Q643R3 524 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 XAF1Q6GPH4 301 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 Q6ZS46 218 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 SERPINA12Q8IW75 414 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 PARP16Q8N5Y8 322 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 OR5D14Q8NGL3 314 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 RGP1Q92546 391 aaPredicted RBP14.74□□□□□ -0.05
FXN-203ENST00000396366 FOXRED1Q96CU9 486 aaPredicted RBP14.74□□□□□ -0.05
FXN-203ENST00000396366 COMMD4Q9H0A8 199 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 RANBP3Q9H6Z4 567 aaPredicted RBP14.74□□□□□ -0.05
FXN-203ENST00000396366 ABCB10Q9NRK6 738 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 INPP5EQ9NRR6 644 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 DHDHQ9UQ10 334 aa14.74□□□□□ -0.05
FXN-203ENST00000396366 TMEM212A6NML5 194 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 SULT1B1O43704 296 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 CLIC3O95833 236 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 CSF1P09603 554 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 ZNF44P15621 663 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 SOX2P48431 317 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 ETV1P50549 477 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 GBX2P52951 348 aaPredicted RBP14.73□□□□□ -0.05
FXN-203ENST00000396366 SLC34A1Q06495 639 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 KLHL22Q53GT1 634 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 LIAT1Q6ZQX7 453 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 Q6ZTK2 550 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 C1QL4Q86Z23 238 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 SAXO1Q8IYX7 474 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 LYG1Q8N1E2 194 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 OR51A2Q8NGJ7 313 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 NDNFQ8TB73 568 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 RPS4Y2Q8TD47 263 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 TSEN15Q8WW01 171 aaKnown RBP14.73□□□□□ -0.05
FXN-203ENST00000396366 CFHR4Q92496 578 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 COQ2Q96H96 371 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 CLEC7AQ9BXN2 247 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 SERTAD4Q9NUC0 356 aa14.73□□□□□ -0.05
FXN-203ENST00000396366 UBE2J1Q9Y385 318 aaPredicted RBP14.73□□□□□ -0.05
FXN-203ENST00000396366 PRKDCP78527 4128 aaKnown RBP14.73□□□□□ -0.05
FXN-203ENST00000396366 SLC33A1O00400 549 aaPredicted RBP14.72□□□□□ -0.05
FXN-203ENST00000396366 DEGS1O15121 323 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms