RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 SIRPB1O00241 398 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 BCL3P20749 454 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 DUSP1P28562 367 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 ZNF91Q05481 1191 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
DDR1-229ENST00000396342 ZNF146Q15072 292 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 KHDC1LQ5JSQ8 128 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 SAMD5Q5TGI4 173 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 SSX6Q7RTT6 188 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 CHST4Q8NCG5 386 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 OR5AU1Q8NGC0 362 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 LIN7BQ9HAP6 207 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 PCDHB16Q9NRJ7 776 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 RBFOX1Q9NWB1 397 aaKnown RBP13.2□□□□□ -0.3
DDR1-229ENST00000396342 TAS2R3Q9NYW6 316 aa13.2□□□□□ -0.3
DDR1-229ENST00000396342 TET2Q6N021 2002 aaPredicted RBP13.2□□□□□ -0.3
DDR1-229ENST00000396342 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 ALX3O95076 343 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 IGHA1P01876 353 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 HCKP08631 526 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 EPHA2P29317 976 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 PTGFRP43088 359 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 LOXL3P58215 753 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 PDZK1IP1Q13113 114 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 TPRX1Q8N7U7 411 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 ZNF565Q8N9K5 539 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 OR5D14Q8NGL3 314 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 OR2G2Q8NGZ5 317 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 EME1Q96AY2 570 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 RNFT2Q96EX2 444 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 CITED2Q99967 270 aaPredicted RBP13.19□□□□□ -0.3
DDR1-229ENST00000396342 GABARAPL3Q9BY60 117 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 COMMD4Q9H0A8 199 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 HMG20AQ9NP66 347 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 SERTAD4Q9NUC0 356 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 OR6C3Q9NZP0 311 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 OAZ3Q9UMX2 235 aa13.19□□□□□ -0.3
DDR1-229ENST00000396342 AMMECR1Q9Y4X0 333 aaPredicted RBP13.19□□□□□ -0.3
DDR1-229ENST00000396342 IGKV1-27A0A075B6S5 117 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 A0A1W2PRX2 142 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 SAC3D1A6NKF1 404 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 F8VVB4 439 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 F8VWA3 439 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 DEGS1O15121 323 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 SLC16A6O15403 523 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 ENTPD6O75354 484 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 ISG15P05161 165 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 FAM106CPP0CH98 169 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 TMEM225BP0DP42 221 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 DBTP11182 482 aaKnown RBP13.18□□□□□ -0.3
DDR1-229ENST00000396342 CDK2P24941 298 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 RBM39Q14498 530 aaKnown RBP13.18□□□□□ -0.3
DDR1-229ENST00000396342 KPRPQ5T749 579 aaPredicted RBP13.18□□□□□ -0.3
DDR1-229ENST00000396342 RDH10Q8IZV5 341 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 DYNAPQ8N1N2 210 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 PRSS35Q8N3Z0 413 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 ACBD7Q8N6N7 88 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 DPF1Q92782 380 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 Q96MT0 163 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 GPR61Q9BZJ8 451 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 MMP28Q9H239 520 aa13.18□□□□□ -0.3
DDR1-229ENST00000396342 VWFP04275 2813 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 OOSP1A8MZH6 123 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 J3QLW9 94 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 OR2H2O95918 312 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 ZNF19P17023 458 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 NPBWR2P48146 333 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 CCR9P51686 369 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 SLC35A2P78381 396 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 BDH1Q02338 343 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 MRPL28Q13084 256 aaKnown RBP13.17□□□□□ -0.3
DDR1-229ENST00000396342 C9orf152Q5JTZ5 239 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 KRBOX4Q5JUW0 171 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 PRAMEF5Q5TYX0 476 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 CCBE1Q6UXH8 406 aaPredicted RBP13.17□□□□□ -0.3
DDR1-229ENST00000396342 HEPN1Q6WQI6 88 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 SAXO1Q8IYX7 474 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 OR52N4Q8NGI2 321 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 OR13C9Q8NGT0 318 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 HAVCR2Q8TDQ0 301 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 ADAT3Q96EY9 351 aaPredicted RBP13.17□□□□□ -0.3
DDR1-229ENST00000396342 HRASLS5Q96KN8 279 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 GPER1Q99527 375 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 ZCCHC4Q9H5U6 513 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 ING3Q9NXR8 418 aa13.17□□□□□ -0.3
DDR1-229ENST00000396342 TSSC4Q9Y5U2 329 aaPredicted RBP13.17□□□□□ -0.3
DDR1-229ENST00000396342 MPZL2O60487 215 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 PSPNO60542 156 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 DUS4LO95620 317 aaKnown RBP13.16□□□□□ -0.3
DDR1-229ENST00000396342 CALCBP10092 127 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 C21orf33P30042 268 aaPredicted RBP13.16□□□□□ -0.3
DDR1-229ENST00000396342 KIR3DL2P43630 455 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 OR3A1P47881 315 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 BLCAPP62952 87 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 AESQ08117 197 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 OXLD1Q5BKU9 147 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 SERPINA12Q8IW75 414 aa13.16□□□□□ -0.3
DDR1-229ENST00000396342 TSEN15Q8WW01 171 aaKnown RBP13.16□□□□□ -0.3
DDR1-229ENST00000396342 RFT1Q96AA3 541 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 108 ms