RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 OR52N4Q8NGI2 321 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RAB1CQ92928 201 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ING1Q9UK53 422 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 COPS3Q9UNS2 423 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 C9orf172C9J069 976 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NEURL1O76050 574 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SNAPINO95295 136 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 HIST3H3Q16695 136 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF626Q68DY1 528 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ABLIM2Q6H8Q1 611 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM123Q8N131 208 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 WDR31Q8NA23 367 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 FDCSPQ8NFU4 85 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 GLYATL2Q8WU03 294 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 RBMXL1Q96E39 390 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NEURL2Q9BR09 285 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 C1QTNF5Q9BXJ0 243 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TMPRSS13Q9BYE2 586 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SAP30LQ9HAJ7 183 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 OR2S2Q9NQN1 319 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NPDC1Q9NQX5 325 aaPredicted RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ATP23Q9Y6H3 246 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SMAD9O15198 467 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SUCLG1P53597 346 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 DGCR2P98153 550 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 NAAAQ02083 359 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 AADACL3Q5VUY0 350 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 SLC25A42Q86VD7 318 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 EXTL1Q92935 676 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 TMEM54Q969K7 222 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 FOXN4Q96NZ1 517 aa2.96□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF385AQ96PM9 386 aaKnown RBP2.96□□□□□ -1.94
VPS13C-203ENST00000395896 MYF5P13349 255 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CALCRP30988 508 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NBL1P41271 181 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ATPAF1Q5TC12 328 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CDCP2Q5VXM1 449 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 HOGA1Q86XE5 327 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FOXRED2Q8IWF2 684 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 BAP18Q8IXM2 172 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NEIL1Q96FI4 390 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF251Q9BRH9 671 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NIPSNAP3BQ9BS92 247 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PIPOXQ9P0Z9 390 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PRRC2AP48634 2157 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 A0A096LPE4 126 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 A0A1W2PPZ6 126 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 RFPL4AA6NLU0 287 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 RFPL4AL1F8VTS6 287 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 F10P00742 488 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CTSDP07339 412 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 UCP2P55851 309 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PEA15Q15121 130 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 BEX5Q5H9J7 111 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 DTX1Q86Y01 620 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OR13C5Q8NGS8 318 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ADAT1Q9BUB4 502 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NMES1Q9C002 83 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SLC2A9Q9NRM0 540 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TRDCB7Z8K6 153 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TGFBR3LH3BV60 316 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PRKNO60260 465 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FABP6P51161 128 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SNTB1Q13884 538 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CFAP77Q6ZQR2 320 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OR5M1Q8NGP8 315 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OR14K1Q8NGZ2 314 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 IL22RA2Q969J5 263 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OR2W1Q9Y3N9 320 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 RGS13O14921 159 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PPYP01298 95 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 VSIG8P0DPA2 414 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 GPM6AP51674 278 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 UCP3P55916 312 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PSG4Q00888 419 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 SRSF7Q16629 238 aaKnown RBP eCLIP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 OVCH2Q7RTZ1 564 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 H2BFWTQ7Z2G1 175 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 TIPARPQ7Z3E1 657 aaKnown RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 HSD17B13Q7Z5P4 300 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FJX1Q86VR8 437 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 UCN2Q96RP3 112 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PLA2G3Q9NZ20 509 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 FAM90A26D6RGX4 464 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 GFRA3O60609 400 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 GPR12P47775 334 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 PRSS53Q2L4Q9 553 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 LINC00303Q3SY05 128 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 NSUN5P2Q63ZY6 315 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 LCN10Q6JVE6 187 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 Q6ZRG5 221 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 CELF2-AS1Q8N7Q2 184 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 RELTQ969Z4 430 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 GALNT14Q96FL9 552 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ARHGAP5-AS1Q96IT6 56 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 ZNF2Q9BSG1 426 aaPredicted RBP2.95□□□□□ -1.94
VPS13C-203ENST00000395896 BEX2Q9BXY8 128 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 BEX1Q9HBH7 125 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MPDU1O75352 247 aa2.95□□□□□ -1.94
VPS13C-203ENST00000395896 MMP9P14780 707 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms