RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 THAP6Q8TBB0 222 aa15.41■□□□□ 0.06
SREBF1-204ENST00000395756 ZNF75AQ96N20 296 aa15.41■□□□□ 0.06
SREBF1-204ENST00000395756 REPIN1Q9BWE0 567 aaKnown RBP15.41■□□□□ 0.06
SREBF1-204ENST00000395756 ASCL3Q9NQ33 180 aa15.41■□□□□ 0.06
SREBF1-204ENST00000395756 LUZP4Q9P127 313 aa15.41■□□□□ 0.06
SREBF1-204ENST00000395756 RBMS3Q6XE24 437 aaKnown RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 MYPOPQ86VE0 399 aaPredicted RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 CPNE2Q96FN4 548 aaPredicted RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 ZNF471Q9BX82 626 aaPredicted RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 OSGIN2Q9Y236 505 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 CDRT15L2A8MXV6 281 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 LY86O95711 162 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 MPZP25189 248 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 CHATP28329 748 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 IDH3GP51553 393 aaPredicted RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 FBXW9Q5XUX1 488 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 BEND4Q6ZU67 534 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 BOLLQ8N9W6 283 aaKnown RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 CCDC54Q8NEL0 328 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 OR5T2Q8NGG2 359 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 APOBEC3DQ96AK3 386 aaPredicted RBP15.4■□□□□ 0.06
SREBF1-204ENST00000395756 POM121L2Q96KW2 1035 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 BIN3Q9NQY0 253 aa15.4■□□□□ 0.06
SREBF1-204ENST00000395756 FPR2P25090 351 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 WNT5AP41221 380 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 LUMP51884 338 aaPredicted RBP15.39■□□□□ 0.05
SREBF1-204ENST00000395756 PHLDA2Q53GA4 152 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 HAGHLQ6PII5 290 aaPredicted RBP15.39■□□□□ 0.05
SREBF1-204ENST00000395756 HPSE2Q8WWQ2 592 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 NARS2Q96I59 477 aaKnown RBP15.39■□□□□ 0.05
SREBF1-204ENST00000395756 DMRTA2Q96SC8 542 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 C14orf166Q9Y224 244 aaKnown RBP15.39■□□□□ 0.05
SREBF1-204ENST00000395756 SYNGR1O43759 233 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 SFT2D2O95562 160 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 S100A9P06702 114 aaKnown RBP15.39■□□□□ 0.05
SREBF1-204ENST00000395756 FCGR3AP08637 254 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 CA6P23280 308 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 RBMXP38159 391 aaKnown RBP15.39■□□□□ 0.05
SREBF1-204ENST00000395756 NHLRC3Q5JS37 347 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 COLCA1Q6ZS62 124 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 C17orf78Q8N4C9 275 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 DCUN1D4Q92564 292 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 OR10C1Q96KK4 312 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 HIST1H2AAQ96QV6 131 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 ANAPC10Q9UM13 185 aa15.39■□□□□ 0.05
SREBF1-204ENST00000395756 CD300LBA8K4G0 201 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 RPL36A-HNRNPH2H7BZ11 118 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 TAS2R31P59538 309 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 ERVS71-1P61550 626 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 FGL1Q08830 312 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 ZNF660Q6AZW8 331 aaPredicted RBP15.38■□□□□ 0.05
SREBF1-204ENST00000395756 CA5BP1Q8WTZ4 195 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 ZNF391Q9UJN7 358 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 A0A1B0GV90 55 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 ABCD4O14678 606 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 ARR3P36575 388 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 S100A10P60903 97 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 LHFPL1Q86WI0 220 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 ZDHHC23Q8IYP9 409 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 SLC30A7Q8NEW0 376 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 LRRC46Q96FV0 321 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 HS3ST1O14792 307 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 SELEP16581 610 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 FCGR2CP31995 323 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 DMRTC2Q8IXT2 367 aaPredicted RBP15.38■□□□□ 0.05
SREBF1-204ENST00000395756 INO80EQ8NBZ0 244 aaPredicted RBP15.38■□□□□ 0.05
SREBF1-204ENST00000395756 SPSB4Q96A44 273 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 GPHA2Q96T91 129 aa15.38■□□□□ 0.05
SREBF1-204ENST00000395756 KANTRA0A1W2PQU2 76 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 CD8AP01732 235 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 RPA2P15927 270 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 PTGER4P35408 488 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 C9orf152Q5JTZ5 239 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 OR1K1Q8NGR3 316 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 SFT2D1Q8WV19 159 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 EDARADDQ8WWZ3 215 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 MTCH1Q9NZJ7 389 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 MED12LQ86YW9 2145 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 F5H0A9 414 aaPredicted RBP15.37■□□□□ 0.05
SREBF1-204ENST00000395756 PSMB6P28072 239 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 MPGP29372 298 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 RBM11P57052 281 aaKnown RBP15.37■□□□□ 0.05
SREBF1-204ENST00000395756 ARL6IP1Q15041 203 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 LPCAT3Q6P1A2 487 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 FAHD2BQ6P2I3 314 aaPredicted RBP15.37■□□□□ 0.05
SREBF1-204ENST00000395756 FAHD2AQ96GK7 314 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 SCGB3A2Q96PL1 93 aa15.37■□□□□ 0.05
SREBF1-204ENST00000395756 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.37■□□□□ 0.05
SREBF1-204ENST00000395756 AGFG2O95081 481 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 NRN1LQ496H8 165 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 TMEM185AQ8NFB2 350 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 ZDHHC11Q9H8X9 412 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 RYDENQ9NUL5 291 aaKnown RBP15.36■□□□□ 0.05
SREBF1-204ENST00000395756 TNFSF18Q9UNG2 199 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 CUL9Q8IWT3 2517 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 PQLC2LA1A4F0 135 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 NOVA1P51513 510 aaKnown RBP15.36■□□□□ 0.05
SREBF1-204ENST00000395756 PIGPP57054 158 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 IKZF1Q13422 519 aa15.36■□□□□ 0.05
SREBF1-204ENST00000395756 Q6ZPA2 131 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms