RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 ECI1P42126 302 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 PCBD1P61457 104 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 FAM71E2Q8N5Q1 922 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 SCGB3A2Q96PL1 93 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 C1orf123Q9NWV4 160 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 TAS2R3Q9NYW6 316 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 PRSS50Q9UI38 385 aa13.18□□□□□ -0.3
CPSF7-202ENST00000394888 BOKQ9UMX3 212 aaPredicted RBP13.18□□□□□ -0.3
CPSF7-202ENST00000394888 C21orf140B9A014 251 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 PRDX4Q13162 271 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 IAH1Q2TAA2 248 aaPredicted RBP13.17□□□□□ -0.3
CPSF7-202ENST00000394888 SLC25A26Q70HW3 274 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 WDR86Q86TI4 376 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 CARHSP1Q9Y2V2 147 aaKnown RBP13.17□□□□□ -0.3
CPSF7-202ENST00000394888 AKAP13Q12802 2813 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 IGKV1D-13A0A0B4J2D9 117 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 ATG12O94817 140 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 IGKV1-13P0DP09 117 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 COX5BP10606 129 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 TMEM211Q6ICI0 200 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 ZNF295-AS1Q8N0V1 137 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 RCL1Q9Y2P8 373 aaKnown RBP13.17□□□□□ -0.3
CPSF7-202ENST00000394888 F12P00748 615 aaPredicted RBP13.17□□□□□ -0.3
CPSF7-202ENST00000394888 IGLV2-14P01704 120 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 FCGR2CP31995 323 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 PCSK4Q6UW60 755 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 SLAMF9Q96A28 289 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 TLNRD1Q9H1K6 362 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 METTL8Q9H825 291 aaKnown RBP13.17□□□□□ -0.3
CPSF7-202ENST00000394888 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
CPSF7-202ENST00000394888 LINC01387J3KSC0 135 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 SRSF7Q16629 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
CPSF7-202ENST00000394888 CEACAM21Q3KPI0 293 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 CALHM2Q9HA72 323 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 Q9N2K0 584 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 FBXL17Q9UF56 701 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 SYNGR1O43759 233 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 TUSC2O75896 110 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 SESN1Q9Y6P5 492 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 LRP3O75074 770 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 MRPL33O75394 65 aaKnown RBP13.16□□□□□ -0.3
CPSF7-202ENST00000394888 APOC3P02656 99 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 UCP2P55851 309 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 ZNF880Q6PDB4 577 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 RTN4IP1Q8WWV3 396 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-202ENST00000394888 TECTBQ96PL2 329 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 GPHA2Q96T91 129 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 S100A13Q99584 98 aa13.16□□□□□ -0.3
CPSF7-202ENST00000394888 C14orf166Q9Y224 244 aaKnown RBP13.16□□□□□ -0.3
CPSF7-202ENST00000394888 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 C5orf49A4QMS7 147 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 M0R296 226 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 ZNF728P0DKX0 622 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 GPM6AP51674 278 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 FGF12P61328 243 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 ZNF585AQ6P3V2 769 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 SAXO1Q8IYX7 474 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 ZFP62Q8NB50 900 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-202ENST00000394888 C12orf4Q9NQ89 552 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 MMP26Q9NRE1 261 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 CHD3Q12873 2000 aaKnown RBP13.15□□□□□ -0.3
CPSF7-202ENST00000394888 CD5P06127 495 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 SP1P08047 785 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 SCTP09683 121 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 GLI4P10075 376 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 MUC1P15941 1255 aaPredicted RBP13.15□□□□□ -0.3
CPSF7-202ENST00000394888 PHLDA2Q53GA4 152 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 OR5P3Q8WZ94 311 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 WDYHV1Q96HA8 205 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 GSKIPQ9P0R6 139 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 GLS2Q9UI32 602 aa13.15□□□□□ -0.3
CPSF7-202ENST00000394888 FUT3P21217 361 aa13.15□□□□□ -0.31
CPSF7-202ENST00000394888 SULT1A2P50226 295 aa13.15□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM33P57088 247 aa13.15□□□□□ -0.31
CPSF7-202ENST00000394888 TGIF1Q15583 401 aa13.15□□□□□ -0.31
CPSF7-202ENST00000394888 LINC00696Q6ZRV3 163 aa13.15□□□□□ -0.31
CPSF7-202ENST00000394888 PRRX2Q99811 253 aa13.15□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A10PA6NDY2 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A18PA6NE21 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A16PA6NEW6 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A20PA6NIJ5 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A8PA6NJQ4 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A7PA6NKC0 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A22PA8MWA6 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A12PA8MX19 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A5PA8MXJ8 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A23PA8MXZ1 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 PPYP01298 95 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A15PP0C7V4 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A13PP0C7W8 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A14PP0C7W9 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 FAM90A24PP0C7X0 464 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 RPL12P30050 165 aaKnown RBP13.14□□□□□ -0.31
CPSF7-202ENST00000394888 RNF141Q8WVD5 230 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 TOMM40LQ969M1 308 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 TMEM231Q9H6L2 316 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 RFNGQ9Y644 331 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 JMJD7P0C870 316 aa13.14□□□□□ -0.31
CPSF7-202ENST00000394888 CCDC157Q569K6 752 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms