RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 C9orf135Q5VTT2 229 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 MOB3AQ96BX8 217 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 SYT3Q9BQG1 590 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 OR2H1Q9GZK4 316 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 ARV1Q9H2C2 271 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 FBXO9Q9UK97 447 aaPredicted RBP12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 DMDP11532 3685 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 hCG_38984A0A1B0GV85 526 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 PQLC2LA1A4F0 135 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 NKX2-6A6NCS4 301 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 C1orf196B1AJZ1 125 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 OR13C7P0DN81 318 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 SPINK2P20155 84 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 PTAFRP25105 342 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 SPIN3Q5JUX0 258 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 C15orf54Q8N8G6 183 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 NAT6Q93015 286 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 GINS3Q9BRX5 216 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 MAGT1Q9H0U3 335 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 SH2D2AQ9NP31 389 aa12.05□□□□□ -0.48
GAPVD1-205ENST00000394084 KIAA1549Q9HCM3 1950 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 GJE1A6NN92 205 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF716A6NP11 495 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 HSPB6O14558 160 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 NXPH3O95157 252 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ARG1P05089 322 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 GLAP06280 429 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 IL11RAQ14626 422 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC23A3Q6PIS1 610 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ASCL4Q6XD76 172 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 GGNQ86UU5 652 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF611Q8N823 705 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 M1APQ8TC57 530 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 HPSE2Q8WWQ2 592 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF845Q96IR2 970 aaPredicted RBP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 SF3B5Q9BWJ5 86 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 SCRT1Q9BWW7 348 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 UMAD1C9J7I0 102 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 PPYP01298 95 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 P04436 131 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 FUT6P51993 359 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 GPR157Q5UAW9 335 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 TMEM42Q69YG0 159 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 OR10D3Q8NH80 312 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 CPT1CQ8TCG5 803 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ABHD3Q8WU67 409 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 NCKAP5O14513 1909 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 A0A1W2PPE3 182 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 A0A1W2PR64 198 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 ACAA1P09110 424 aaPredicted RBP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 EDN3P14138 238 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 OTX2P32243 289 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 POLR2GP62487 172 aaKnown RBP eCLIP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 EWSR1Q01844 656 aaKnown RBP eCLIP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 GNMTQ14749 295 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 RBMS3Q6XE24 437 aaKnown RBP12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 LRTM2Q8N967 370 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 OR2Y1Q8NGV0 311 aa12.04□□□□□ -0.48
GAPVD1-205ENST00000394084 C3orf85A0A1B0GTC6 90 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 GPR37O15354 613 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 S100A6P06703 90 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 IL13RA2Q14627 380 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 CCDC71LQ8N9Z2 235 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 ABHD14AQ9BUJ0 271 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 RNF122Q9H9V4 155 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 UBE2J1Q9Y385 318 aaPredicted RBP12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 PATE3B3GLJ2 98 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 CCL2P13500 99 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 FUT3P21217 361 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 FOLR3P41439 243 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC16A13Q7RTY0 426 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 SLAMF9Q96A28 289 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 SLC7A10Q9NS82 523 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 SIT1Q9Y3P8 196 aa12.03□□□□□ -0.48
GAPVD1-205ENST00000394084 ZNF816-ZNF321PA0A0X1KG74 233 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 A0A1W2PPE2 198 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 MPPED1O15442 326 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 IFNA4P05014 189 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 SRD5A2P31213 254 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 HMGN3Q15651 99 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 FAM24BQ8N5W8 94 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 NANPQ8TBE9 248 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 CLDN23Q96B33 292 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 RARRES2Q99969 163 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 RSRP1Q9BUV0 290 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 GPR35Q9HC97 309 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 KCNJ16Q9NPI9 418 aa12.02□□□□□ -0.48
GAPVD1-205ENST00000394084 CDRT15L2A8MXV6 281 aa12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 CEBPGP53567 150 aa12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 DAZAP2Q15038 168 aaPredicted RBP12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 EIF2S3LQ2VIR3 472 aaKnown RBP12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 OR4D5Q8NGN0 318 aa12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 EXTL1Q92935 676 aa12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 BOD1Q96IK1 185 aa12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 PARPBPQ9NWS1 579 aa12.02□□□□□ -0.49
GAPVD1-205ENST00000394084 CRIM1Q9NZV1 1036 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms