RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 TACC2O95359 2948 aa11.02□□□□□ -0.64
USP44-202ENST00000393091 TRAV24A0A0B4J272 114 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 hCG_1807616A0A1W2PRN6 198 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 OR2H2O95918 312 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 HEXAP06865 529 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 MELTFP08582 738 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 RAB12Q6IQ22 244 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 BIVMQ86UB2 503 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 OR8B3Q8NGG8 313 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 SLC25A38Q96DW6 304 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 OR8B2Q96RD0 313 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 URM1Q9BTM9 101 aaKnown RBP11.02□□□□□ -0.65
USP44-202ENST00000393091 TMEM59Q9BXS4 323 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 TK1P04183 234 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 OR3A1P47881 315 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 CD276Q5ZPR3 534 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 SLC35E4Q6ICL7 350 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 OR56B1Q8NGI3 324 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 PLGRKTQ9HBL7 147 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 OPN4Q9UHM6 478 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 ST3GAL6Q9Y274 331 aa11.02□□□□□ -0.65
USP44-202ENST00000393091 TMEM82A0PJX8 343 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 RFPL4AA6NLU0 287 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 RFPL4AL1F8VTS6 287 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 DIRAS3O95661 229 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 CSTBP04080 98 aaKnown RBP11.01□□□□□ -0.65
USP44-202ENST00000393091 HNRNPA0Q13151 305 aaKnown RBP11.01□□□□□ -0.65
USP44-202ENST00000393091 OR8H2Q8N162 312 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 OR51D1Q8NGF3 324 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 ST8SIA4Q92187 359 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 ANAPC10Q9UM13 185 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 MGST3O14880 152 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 APOA1P02647 267 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 CGB3P0DN86 165 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 CGB7P0DN87 165 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 SOX6P35712 828 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 TUSC1Q2TAM9 212 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 DMRTC1Q5HYR2 192 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 HES5Q5TA89 166 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 WDR25Q64LD2 544 aaPredicted RBP11.01□□□□□ -0.65
USP44-202ENST00000393091 MZT2AQ6P582 158 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 LYPD2Q6UXB3 125 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 OR5D18Q8NGL1 313 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 SOSTQ9BQB4 213 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 UNKLQ9H9P5 680 aaKnown RBP11.01□□□□□ -0.65
USP44-202ENST00000393091 DNAJB11Q9UBS4 358 aa11.01□□□□□ -0.65
USP44-202ENST00000393091 RAB27BO00194 218 aa11□□□□□ -0.65
USP44-202ENST00000393091 PDCD6O75340 191 aa11□□□□□ -0.65
USP44-202ENST00000393091 FOXH1O75593 365 aa11□□□□□ -0.65
USP44-202ENST00000393091 HTR3BO95264 441 aa11□□□□□ -0.65
USP44-202ENST00000393091 FUT3P21217 361 aa11□□□□□ -0.65
USP44-202ENST00000393091 PTBP1P26599 531 aaKnown RBP eCLIP11□□□□□ -0.65
USP44-202ENST00000393091 ETV6P41212 452 aa11□□□□□ -0.65
USP44-202ENST00000393091 DVL1P1P54792 670 aaPredicted RBP11□□□□□ -0.65
USP44-202ENST00000393091 COL10A1Q03692 680 aa11□□□□□ -0.65
USP44-202ENST00000393091 KRTAP1-1Q07627 177 aa11□□□□□ -0.65
USP44-202ENST00000393091 TMEM30BQ3MIR4 351 aa11□□□□□ -0.65
USP44-202ENST00000393091 NLRC3Q7RTR2 1065 aa11□□□□□ -0.65
USP44-202ENST00000393091 WFDC11Q8NEX6 87 aa11□□□□□ -0.65
USP44-202ENST00000393091 OR10A7Q8NGE5 316 aa11□□□□□ -0.65
USP44-202ENST00000393091 TRAV20A0A0B4J274 112 aa11□□□□□ -0.65
USP44-202ENST00000393091 J3QLI3 93 aa11□□□□□ -0.65
USP44-202ENST00000393091 GYPAP02724 150 aa11□□□□□ -0.65
USP44-202ENST00000393091 GZMKP49863 264 aa11□□□□□ -0.65
USP44-202ENST00000393091 PNLIPRP3Q17RR3 467 aa11□□□□□ -0.65
USP44-202ENST00000393091 LY6G6FQ5SQ64 297 aa11□□□□□ -0.65
USP44-202ENST00000393091 FAM201AQ5SY85 155 aa11□□□□□ -0.65
USP44-202ENST00000393091 ZNF497Q6ZNH5 498 aa11□□□□□ -0.65
USP44-202ENST00000393091 PPP1R35Q8TAP8 253 aa11□□□□□ -0.65
USP44-202ENST00000393091 DCTN5Q9BTE1 182 aa11□□□□□ -0.65
USP44-202ENST00000393091 MMP27Q9H306 513 aa11□□□□□ -0.65
USP44-202ENST00000393091 DAPK2Q9UIK4 370 aa11□□□□□ -0.65
USP44-202ENST00000393091 CSMD2Q7Z408 3487 aa11□□□□□ -0.65
USP44-202ENST00000393091 ITPR2Q14571 2701 aa11□□□□□ -0.65
USP44-202ENST00000393091 H7C1Q1 480 aa11□□□□□ -0.65
USP44-202ENST00000393091 LIPFP07098 398 aa11□□□□□ -0.65
USP44-202ENST00000393091 IGHV4-31P0DP07 118 aa11□□□□□ -0.65
USP44-202ENST00000393091 DLX6P56179 175 aa11□□□□□ -0.65
USP44-202ENST00000393091 PIGYQ3MUY2 71 aa11□□□□□ -0.65
USP44-202ENST00000393091 RIMS4Q9H426 269 aaPredicted RBP11□□□□□ -0.65
USP44-202ENST00000393091 FUOMA2VDF0 154 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 MFNGO00587 321 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 GEMIN2O14893 280 aaKnown RBP10.99□□□□□ -0.65
USP44-202ENST00000393091 CRTAPO75718 401 aaPredicted RBP10.99□□□□□ -0.65
USP44-202ENST00000393091 SLC2A2P11168 524 aaPredicted RBP10.99□□□□□ -0.65
USP44-202ENST00000393091 SERPINA2P20848 420 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 PITPNBP48739 271 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 RBM39Q14498 530 aaKnown RBP10.99□□□□□ -0.65
USP44-202ENST00000393091 SLC22A6Q4U2R8 563 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 LRRC10Q5BKY1 277 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 RSBN1Q5VWQ0 802 aaPredicted RBP10.99□□□□□ -0.65
USP44-202ENST00000393091 BAIAP2L2Q6UXY1 529 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 LINC01356Q8N9X3 169 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 LGALS14Q8TCE9 139 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 FAM216AQ8WUB2 273 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 FAM46BQ96A09 425 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 SSBP3Q9BWW4 388 aaPredicted RBP10.99□□□□□ -0.65
USP44-202ENST00000393091 IL36RNQ9UBH0 155 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 ADAM30Q9UKF2 790 aa10.99□□□□□ -0.65
USP44-202ENST00000393091 UBE2J1Q9Y385 318 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms