RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RASL12Q9NYN1 266 aa14.5□□□□□ -0.09
SCN3B-202ENST00000392770 TUBAL3A6NHL2 446 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 UMAD1C9J7I0 102 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 GAL3ST2Q9H3Q3 398 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 ADH4P08319 380 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 FSTP19883 344 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 PPP1R32Q7Z5V6 425 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 TBC1D26Q86UD7 250 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 OR4F5Q8NH21 305 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 POM121L2Q96KW2 1035 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 OR4F4Q96R69 305 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 HIF1ANQ9NWT6 349 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 KLK13Q9UKR3 277 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 A0A0U1RQV5 110 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 K7ESF4 209 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 APCDD1LQ8NCL9 501 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 SLC7A10Q9NS82 523 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 COX5AP20674 150 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 MAP6Q96JE9 813 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 IL17BQ9UHF5 180 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 PRSS50Q9UI38 385 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 URB1O60287 2271 aaKnown RBP14.49□□□□□ -0.09
SCN3B-202ENST00000392770 TMEM229AB2RXF0 380 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 ICMTO60725 284 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 IGHV3-13P01766 116 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 IGHV3-7P01780 117 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 DTYMKP23919 212 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 ROM1Q03395 351 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 STUMQ69YW2 141 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 FAHD2BQ6P2I3 314 aaPredicted RBP14.49□□□□□ -0.09
SCN3B-202ENST00000392770 FAHD2AQ96GK7 314 aa14.49□□□□□ -0.09
SCN3B-202ENST00000392770 OOEPA6NGQ2 149 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 J3QT63 122 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 MPC2O95563 127 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 RAB5CP51148 216 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 OR5G3P0C626 314 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF528Q3MIS6 628 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 CLEC18BQ6UXF7 455 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 MED30Q96HR3 178 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 C19orf12Q9NSK7 152 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF107Q9UII5 783 aaPredicted RBP14.48□□□□□ -0.09
SCN3B-202ENST00000392770 TDRD6O60522 2096 aaKnown RBP14.48□□□□□ -0.09
SCN3B-202ENST00000392770 hADV38S2A0JD32 116 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 OR10J4P0C629 311 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 AVPI1Q5T686 147 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 ZBTB44Q8NCP5 570 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 OR2J1Q9GZK6 312 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 GPR27Q9NS67 375 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 TMEM210A6NLX4 147 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 LMX1BO60663 402 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 PMELP40967 661 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 RPS4XP62701 263 aaKnown RBP14.48□□□□□ -0.09
SCN3B-202ENST00000392770 TMEM105Q8N8V8 129 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 LHX4Q969G2 390 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 LHFPL6Q9Y693 200 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 CPN1P15169 458 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 KIR2DS2P43631 304 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 AANATQ16613 207 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 VMA21Q3ZAQ7 101 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 ZFP82Q8N141 532 aa14.48□□□□□ -0.09
SCN3B-202ENST00000392770 TSC2P49815 1807 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ADRB1P08588 477 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 TAS2R45P59539 299 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 HIST2H3AQ71DI3 136 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ST6GAL2Q96JF0 529 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 SOX7Q9BT81 388 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ADAD2Q8NCV1 583 aaKnown RBP14.47□□□□□ -0.09
SCN3B-202ENST00000392770 PRR7Q8TB68 274 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 OR6C3Q9NZP0 311 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 PIKFYVEQ9Y2I7 2098 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF205O95201 554 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 SURF2Q15527 256 aaPredicted RBP14.47□□□□□ -0.09
SCN3B-202ENST00000392770 TEX30Q5JUR7 227 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 FAM214BQ7L5A3 538 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 CACNG5Q9UF02 275 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF705FA8MVS1 300 aaPredicted RBP14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF883P0CG24 379 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF705DP0CH99 300 aaPredicted RBP14.47□□□□□ -0.09
SCN3B-202ENST00000392770 ZNF705BP0CI00 300 aaPredicted RBP14.47□□□□□ -0.09
SCN3B-202ENST00000392770 CD37P11049 281 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 FOXO1Q12778 655 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 LINC00596Q86U02 117 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 FAM96BQ9Y3D0 163 aa14.47□□□□□ -0.09
SCN3B-202ENST00000392770 RPL36A-HNRNPH2H7BZ11 118 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 ADAP1O75689 374 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 SPINK9Q5DT21 86 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 K7EQM0 130 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 CDX4O14627 284 aaPredicted RBP14.46□□□□□ -0.09
SCN3B-202ENST00000392770 TMPRSS2O15393 492 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 BPIFB3P59826 476 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 MPV17LQ2QL34 196 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 PXDC1Q5TGL8 231 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 OR5M8Q8NGP6 311 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 HDHD3Q9BSH5 251 aaPredicted RBP14.46□□□□□ -0.09
SCN3B-202ENST00000392770 RAB1BQ9H0U4 201 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 KLF4O43474 513 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 SLC25A42Q86VD7 318 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 PTX4Q96A99 478 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 NTNG2Q96CW9 530 aa14.46□□□□□ -0.09
SCN3B-202ENST00000392770 URGCP-MRPS24S4R325 110 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms