RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 B3GALT1Q9Y5Z6 326 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 RBFOX3A6NFN3 312 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 OMGP23515 440 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 RND3P61587 244 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 C17orf78Q8N4C9 275 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 CDX2Q99626 313 aaPredicted RBP15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 ARV1Q9H2C2 271 aa15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 PTRH2Q9Y3E5 179 aaKnown RBP15.4■□□□□ 0.06
SQSTM1-202ENST00000389805 E5RGE8 158 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 E9PLN8 166 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 UMODP07911 640 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 G0S2P27469 103 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF429Q86V71 674 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 CYB561D1Q8N8Q1 229 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 OR52M1Q8NGK5 317 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 SNX22Q96L94 193 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 OR10A2Q9H208 303 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 C19orf25Q9UFG5 118 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 TUBD1Q9UJT1 453 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 NSG2Q9Y328 171 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 IGLV3-32A0A0A0MS00 114 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 DHRS7CA6NNS2 312 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 CCL3P10147 92 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 IL2RGP31785 369 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 SPCS3P61009 180 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 OR8G1Q15617 311 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 NAXEQ8NCW5 288 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 OR2AJ1Q8NGZ0 328 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 HPSE2Q8WWQ2 592 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 ANAPC10Q9UM13 185 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 SLC33A1O00400 549 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 HSD17B6O14756 317 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 HPNP05981 417 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 CLDN17P56750 224 aa15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF121P58317 390 aaPredicted RBP15.39■□□□□ 0.05
SQSTM1-202ENST00000389805 TAS2R46P59540 309 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 GABREP78334 506 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 OR8B12Q8NGG6 310 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 OR2G3Q8NGZ4 309 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 PGA5P0DJD9 388 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 NOVA1P51513 510 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 PIGPP57054 158 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 FXYD4P59646 89 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 SLC25A47Q6Q0C1 308 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 URM1Q9BTM9 101 aaKnown RBP15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 GPR84Q9NQS5 396 aa15.38■□□□□ 0.05
SQSTM1-202ENST00000389805 A0A087WZY1 265 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF724A8MTY0 619 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 K7N7A8 449 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 GEMIN2O14893 280 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 OR5AC1P0C628 307 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 HIKESHIQ53FT3 197 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 PHLDA2Q53GA4 152 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 PHYHD1Q5SRE7 291 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 C6orf201Q7Z4U5 140 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 RHBDD1Q8TEB9 315 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 OXGR1Q96P68 337 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 UCN2Q96RP3 112 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 KCNIP3Q9Y2W7 256 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 STRAPQ9Y3F4 350 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 SMCO3A2RU48 225 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 GPR137BO60478 399 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 KLF7O75840 302 aaPredicted RBP15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 PTBP3O95758 552 aaKnown RBP15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 ONECUT2O95948 504 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF17P17021 662 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 C21orf62-AS1Q17RA5 79 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 FAM57BQ71RH2 274 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 FADS6Q8N9I5 356 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 PADI1Q9ULC6 663 aa15.37■□□□□ 0.05
SQSTM1-202ENST00000389805 CCDC163A0A0D9SF12 145 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 CYTIPO60759 359 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 RRADP55042 308 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 DPPA2Q7Z7J5 298 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 DTX1Q86Y01 620 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 OR6X1Q8NH79 312 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 HIST1H2BLQ99880 126 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 LIME1Q9H400 295 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 BCO1Q9HAY6 547 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 PNRC2Q9NPJ4 139 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 MCTS1Q9ULC4 181 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 SHANK1Q9Y566 2161 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 IGHV1-45A0A0A0MS14 117 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 NSG1A0A0A6YYJ2 146 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 FGF5P12034 268 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 GABRR1P24046 479 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 APLNRP35414 380 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF468Q5VIY5 522 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 FBXW12Q6X9E4 464 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 NAT6Q93015 286 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF385AQ96PM9 386 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 NXT1Q9UKK6 140 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 ZNF705GA8MUZ8 300 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 SRP19P09132 144 aaKnown RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 OR5H8P0DN80 308 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 HIST2H3PS2Q5TEC6 136 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 LRRC18Q8N456 261 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 SUMF1Q8NBK3 374 aa15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 LIN37Q96GY3 246 aaPredicted RBP15.36■□□□□ 0.05
SQSTM1-202ENST00000389805 PECRQ9BY49 303 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms