RNA–Protein interactions for RNA: ENST00000382020.8

TUSC3-201, Transcript of tumor suppressor candidate 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUSC3, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-201ENST00000382020 THEM4Q5T1C6 240 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 WDR25Q64LD2 544 aaPredicted RBP13.03□□□□□ -0.32
TUSC3-201ENST00000382020 OR5C1Q8NGR4 320 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 RNF133Q8WVZ7 376 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 LIPHQ8WWY8 451 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 SIRT7Q9NRC8 400 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 TTC28Q96AY4 2481 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 IGKV1D-8A0A087WSZ0 117 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 WDR1O75083 606 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 EFNA3P52797 238 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 ZNF66Q6ZN08 573 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 NOXO1Q8NFA2 376 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 PHOSPHO2Q8TCD6 241 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 AQP3Q92482 292 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 HINT2Q9BX68 163 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 SLC26A1Q9H2B4 701 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 GPR132Q9UNW8 380 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 THSD7BQ9C0I4 1608 aa13.03□□□□□ -0.32
TUSC3-201ENST00000382020 BLACEA4D250 179 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 C2CD4DB7Z1M9 353 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 MSR1P21757 451 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 SNCAP37840 140 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 ISXQ2M1V0 245 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 HLA-BQ31612 363 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 NAT6Q93015 286 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 ABHD14AQ9BUJ0 271 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 NECAP2Q9NVZ3 263 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 CBY1Q9Y3M2 126 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 CACNA1BQ00975 2339 aa13.02□□□□□ -0.32
TUSC3-201ENST00000382020 TGOLN2O43493 480 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 TK1P04183 234 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 SOD3P08294 240 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 ERVS71-1P61550 626 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 HOGA1Q86XE5 327 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 TVP23CQ96ET8 276 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 SMIM8Q96KF7 97 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 ADAM19Q9H013 955 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 LHFPL6Q9Y693 200 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 WNK2Q9Y3S1 2297 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 RBFOX3A6NFN3 312 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 AAED1Q7RTV5 226 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 OR10AD1Q8NGE0 317 aa13.02□□□□□ -0.33
TUSC3-201ENST00000382020 CCDC187A0A096LP49 1063 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 C9J4A7 227 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 CXCL13O43927 109 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 FCGR3AP08637 254 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H1BP16401 226 aaKnown RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 MMP16P51512 607 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 PMP22Q01453 160 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 OR52M1Q8NGK5 317 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 Q8WTZ3 238 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 MFRPQ9BY79 579 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 CALHM2Q9HA72 323 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 RNF150Q9ULK6 438 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 PPP1R3CQ9UQK1 317 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 TIMM10BQ9Y5J6 103 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 NSG1A0A0A6YYJ2 146 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 DFFBO76075 338 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 DXOO77932 396 aaKnown RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 CXCL1P09341 107 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 ZNF519Q8TB69 540 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 E5RGE8 158 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 ZNF708P17019 499 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 MSX1P28360 303 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 ARF1P84077 181 aaKnown RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 SPINK9Q5DT21 86 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 CCDC71LQ8N9Z2 235 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 ADIPOR1Q96A54 375 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 SEBOXQ9HB31 216 aaPredicted RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 PATZ1Q9HBE1 687 aaKnown RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 MCTS1Q9ULC4 181 aaKnown RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 NSG2Q9Y328 171 aa13.01□□□□□ -0.33
TUSC3-201ENST00000382020 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
TUSC3-201ENST00000382020 A0A1B0GTQ1 180 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 XKRY2A2RUG3 117 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 F8VVB4 439 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 F8VWA3 439 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 ADAM20O43506 726 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BKO60814 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BJP06899 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BOP23527 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BBP33778 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BDP58876 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BCP62807 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST2H2BEQ16778 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 MPV17LQ2QL34 196 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST2H2BFQ5QNW6 126 aaPredicted RBP13□□□□□ -0.33
TUSC3-201ENST00000382020 AADACL3Q5VUY0 350 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 BTNL8Q6UX41 500 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 MRPL21Q7Z2W9 205 aaKnown RBP13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BHQ93079 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BNQ99877 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 HIST1H2BMQ99879 126 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 ELOVL1Q9BW60 279 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 GPR87Q9BY21 358 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 CHST5Q9GZS9 411 aa13□□□□□ -0.33
TUSC3-201ENST00000382020 IGHV1OR21-1A0A087WYE8 117 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms