RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 C16orf82Q7Z2V1 217 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 KCTD20Q7Z5Y7 419 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 FGGYQ96C11 551 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 AKR1E2Q96JD6 320 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 OR5M11Q96RB7 305 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 MBOAT4Q96T53 435 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 NEK6Q9HC98 313 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 HHLA2Q9UM44 414 aa13.86□□□□□ -0.19
HMGN1-204ENST00000380749 IGKV1-9A0A0C4DH69 117 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 SH2D1BO14796 132 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 SLC16A6O15403 523 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 PDZK1IP1Q13113 114 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 OR4P4Q8NGL7 312 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 OR13C3Q8NGS6 347 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 WIPF2Q8TF74 440 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-204ENST00000380749 CAPSLQ8WWF8 208 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 RFT1Q96AA3 541 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 RNFT2Q96EX2 444 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 MRPL48Q96GC5 212 aaKnown RBP13.85□□□□□ -0.19
HMGN1-204ENST00000380749 CITED2Q99967 270 aaPredicted RBP13.85□□□□□ -0.19
HMGN1-204ENST00000380749 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 HMG20AQ9NP66 347 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 GSTK1Q9Y2Q3 226 aa13.85□□□□□ -0.19
HMGN1-204ENST00000380749 DAPL1A0PJW8 107 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 SNTNA6NMZ2 147 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 CALCBP10092 127 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 JUNBP17275 347 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-204ENST00000380749 TMEM95Q3KNT9 176 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 PRAMEF5Q5TYX0 476 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 MEDAGQ5VYS4 303 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 FDX2Q6P4F2 183 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 RTN4RL2Q86UN3 420 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 ZNF596Q8TC21 504 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 RNF166Q96A37 237 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-204ENST00000380749 MYCBPQ99417 103 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-204ENST00000380749 MMP28Q9H239 520 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 RHOFQ9HBH0 211 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 FRRS1LQ9P0K9 344 aa13.84□□□□□ -0.19
HMGN1-204ENST00000380749 PIN1P1O15428 100 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 OR2H2O95918 312 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 ZNF44P15621 663 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 BRS3P32247 399 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 CCR9P51686 369 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 NANOS3P60323 173 aaKnown RBP13.83□□□□□ -0.19
HMGN1-204ENST00000380749 BLCAPP62952 87 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 FBLN7Q53RD9 439 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 HEPN1Q6WQI6 88 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 ABHD12Q8N2K0 398 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 OR13C9Q8NGT0 318 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 HRASLS5Q96KN8 279 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 COMMD4Q9H0A8 199 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 LIN7BQ9HAP6 207 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 FAM53CQ9NYF3 392 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.83□□□□□ -0.19
HMGN1-204ENST00000380749 DPM3Q9P2X0 92 aa13.83□□□□□ -0.19
HMGN1-204ENST00000380749 FAM90A22PA8MWA6 464 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 KDM4BO94953 1096 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 MT-ND2P03891 347 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 ALPLP05186 524 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 CDK2P24941 298 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 PTGFRP43088 359 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 SNRPGP62308 76 aaKnown RBP13.83□□□□□ -0.2
HMGN1-204ENST00000380749 BDH1Q02338 343 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 SLC25A30Q5SVS4 291 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 ACBD7Q8N6N7 88 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 CHST4Q8NCG5 386 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 OR5D18Q8NGL1 313 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 CREB3L1Q96BA8 519 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 TAS2R3Q9NYW6 316 aa13.83□□□□□ -0.2
HMGN1-204ENST00000380749 IGKV1-12A0A0C4DH73 117 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 ADARB2-AS1A8MUL3 147 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 LEUTXA8MZ59 168 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 J3QLW9 94 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 J3QRE1 110 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 EI24O14681 340 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 MMP23AO75900 390 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 IGKV1D-12P01611 117 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 PRB2P02812 416 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-204ENST00000380749 CSN2P05814 226 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 ZNF19P17023 458 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 CEACAM3P40198 252 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 AESQ08117 197 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 KPNB1Q14974 876 aaKnown RBP13.82□□□□□ -0.2
HMGN1-204ENST00000380749 Q6ZS46 218 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 SAXO1Q8IYX7 474 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 OR51A4Q8NGJ6 313 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 OR10AC1Q8NH08 325 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 PYDC1Q8WXC3 89 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 PELI1Q96FA3 418 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 C4orf36Q96KX1 117 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 SPACA5Q96QH8 159 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 NECAP2Q9NVZ3 263 aa13.82□□□□□ -0.2
HMGN1-204ENST00000380749 DNAH9Q9NYC9 4486 aa13.81□□□□□ -0.2
HMGN1-204ENST00000380749 ODAMA1E959 279 aa13.81□□□□□ -0.2
HMGN1-204ENST00000380749 FAM172BPA6NC97 362 aa13.81□□□□□ -0.2
HMGN1-204ENST00000380749 TOR1AO14656 332 aa13.81□□□□□ -0.2
HMGN1-204ENST00000380749 HCKP08631 526 aa13.81□□□□□ -0.2
HMGN1-204ENST00000380749 RPSAP08865 295 aaKnown RBP13.81□□□□□ -0.2
HMGN1-204ENST00000380749 LMO1P25800 156 aa13.81□□□□□ -0.2
HMGN1-204ENST00000380749 SCN1BQ07699 218 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms