RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 DOCK1Q14185 1865 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 SOX15O60248 233 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 P2RY1P47900 373 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 HNRNPA3P51991 378 aaKnown RBP14.16□□□□□ -0.14
COL2A1-202ENST00000380518 SPINK14Q6IE38 97 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 OR10D4PQ8NGN7 298 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 FAM117AQ9C073 453 aa14.16□□□□□ -0.14
COL2A1-202ENST00000380518 NTN1O95631 604 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 ANKRD34CP0C6C1 535 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 GABRA1P14867 456 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 KIR2DL1P43626 348 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-202ENST00000380518 PRRX1P54821 245 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 FNDC7Q5VTL7 733 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 SEZ6L2Q6UXD5 910 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 C11orf42Q8N5U0 333 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 THYN1Q9P016 225 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 HRKO00198 91 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 TMIGD3P0DMS9 266 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-202ENST00000380518 PRSS12P56730 875 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 HIST1H3AP68431 136 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 CLPPQ16740 277 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-202ENST00000380518 TOMM20LQ6UXN7 152 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 TBC1D26Q86UD7 250 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 PTPMT1Q8WUK0 201 aaPredicted RBP14.15□□□□□ -0.14
COL2A1-202ENST00000380518 PNPP00491 289 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 HLA-GP17693 338 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 HLA-DRB3P79483 266 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 CD300CQ08708 224 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 RNF133Q8WVZ7 376 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 SH2D2AQ9NP31 389 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 LPAR3Q9UBY5 353 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 TCRBV16S1A1N1A0A5B0 115 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 B3GALNT1O75752 331 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 GYPAP02724 150 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 MMP16P51512 607 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 OR1L4Q8NGR5 311 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 VSTM2AQ8TAG5 236 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 ASB5Q8WWX0 329 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 OPN4Q9UHM6 478 aa14.15□□□□□ -0.14
COL2A1-202ENST00000380518 OR2J3O76001 311 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 TOX4O94842 621 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 EML2O95834 649 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 TRIP6Q15654 476 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 HES3Q5TGS1 186 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 SCMH1Q96GD3 660 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 CRISPLD2Q9H0B8 497 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 SPTA1P02549 2419 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 PPIHO43447 177 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 CXCL3P19876 107 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 CEACAM3P40198 252 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 GZMMP51124 257 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 PNRC1Q12796 327 aaPredicted RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 SLC25A42Q86VD7 318 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 MED19A0JLT2 244 aaPredicted RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 GATCO43716 136 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 ACTL6AO96019 429 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 SPCS3P61009 180 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 SNRPEP62304 92 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 MRPS11P82912 194 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 VPS25Q9BRG1 176 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 MRPS18AQ9NVS2 196 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 RBFOX3A6NFN3 312 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 PLA2G10O15496 165 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 BGLAPP02818 100 aa14.14□□□□□ -0.15
COL2A1-202ENST00000380518 RPS4XP62701 263 aaKnown RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 AMMECR1Q9Y4X0 333 aaPredicted RBP14.14□□□□□ -0.15
COL2A1-202ENST00000380518 TRAV8-7A0A075B6U6 113 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 C5orf67F2Z3F1 127 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 GEMIN2O14893 280 aaKnown RBP14.13□□□□□ -0.15
COL2A1-202ENST00000380518 WISP3O95389 354 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-202ENST00000380518 MBPP02686 304 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-202ENST00000380518 TSPO2Q5TGU0 170 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 TMEM211Q6ICI0 200 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 PARD6AQ9NPB6 346 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 OR1A1Q9P1Q5 309 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 CES1P1Q9UKY3 287 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 DUXBA0A1W2PPF3 345 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 FCN1O00602 326 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 SPINT1O43278 529 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 PPYP01298 95 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 SRSF5Q13243 272 aaKnown RBP14.13□□□□□ -0.15
COL2A1-202ENST00000380518 TMEM91Q6ZNR0 172 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 TUSC5Q8IXB3 177 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 TRPM6Q9BX84 2022 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 A0A1B0GTQ1 180 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 SH2D7A6NKC9 451 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-202ENST00000380518 CCL4P13236 92 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
COL2A1-202ENST00000380518 MPV17LQ2QL34 196 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 SPINK9Q5DT21 86 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 NARFLQ9H6Q4 476 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 AMDHD2Q9Y303 409 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 R4GN57 208 aa14.13□□□□□ -0.15
COL2A1-202ENST00000380518 DNPH1O43598 174 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 GOSR1O95249 250 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 HPXP02790 462 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 DYNLT3P51808 116 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 SOX8P57073 446 aa14.12□□□□□ -0.15
COL2A1-202ENST00000380518 HSD17B10Q99714 261 aaKnown RBP14.12□□□□□ -0.15
COL2A1-202ENST00000380518 ATP5SQ99766 215 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms