RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 NAXEQ8NCW5 288 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 EXTL1Q92935 676 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 CNTNAP3BQ96NU0 1288 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 CNTNAP3Q9BZ76 1288 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 METTL8Q9H825 291 aaKnown RBP19.81■□□□□ 0.76
VPS16-201ENST00000380443 TUBG2Q9NRH3 451 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 RDH8Q9NYR8 311 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 MTCH1Q9NZJ7 389 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 ZNF581Q9P0T4 197 aa19.81■□□□□ 0.76
VPS16-201ENST00000380443 UNQ6126/PRO20091Q6UXV3 157 aa19.8■□□□□ 0.76
VPS16-201ENST00000380443 ANGPTL6Q8NI99 470 aa19.8■□□□□ 0.76
VPS16-201ENST00000380443 KNG1P01042 644 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 CBR1P16152 277 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 COX5AP20674 150 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 PTGER4P35408 488 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 ZNF169Q14929 603 aaPredicted RBP19.79■□□□□ 0.76
VPS16-201ENST00000380443 DAZAP2Q15038 168 aaPredicted RBP19.79■□□□□ 0.76
VPS16-201ENST00000380443 LRRC37A5PQ49AS3 106 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 SLC38A6Q8IZM9 456 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 PHYHIPLQ96FC7 376 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 GALNT14Q96FL9 552 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 MICU1Q9BPX6 476 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 SYT3Q9BQG1 590 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 CRIM1Q9NZV1 1036 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 A0A1B0GW55 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 RNF222A6NCQ9 220 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 CTXN2P0C2S0 81 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4L2P0CJ85 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4L3P0CJ86 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4L4P0CJ87 422 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4L5P0CJ88 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4L6P0CJ89 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4L7P0CJ90 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 RAC2P15153 192 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 COMMD7Q86VX2 200 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 MOB3AQ96BX8 217 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 RTL8AQ9BWD3 113 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 IFT22Q9H7X7 185 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 MBD2Q9UBB5 411 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 DUX4Q9UBX2 424 aa19.79■□□□□ 0.76
VPS16-201ENST00000380443 TEX13DA0A0J9YY54 714 aaPredicted RBP19.78■□□□□ 0.76
VPS16-201ENST00000380443 SMPD2O60906 423 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 NAPSAO96009 420 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 HOXC12P31275 282 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 KIR2DL2P43627 348 aaPredicted RBP19.78■□□□□ 0.76
VPS16-201ENST00000380443 PPP1CBP62140 327 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 ABCA11PQ4W5N1 156 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 OR5M9Q8NGP3 310 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 OR51I2Q9H344 312 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 OBP2BQ9NPH6 170 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 PLSCR4Q9NRQ2 329 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 MED12LQ86YW9 2145 aa19.78■□□□□ 0.76
VPS16-201ENST00000380443 J3QT63 122 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 FCGR2CP31995 323 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 NUP62P37198 522 aaPredicted RBP19.77■□□□□ 0.76
VPS16-201ENST00000380443 OR2T2Q6IF00 324 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 PRSS54Q6PEW0 395 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 HAGHLQ6PII5 290 aaPredicted RBP19.77■□□□□ 0.76
VPS16-201ENST00000380443 Q8IYB0 196 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 C17orf78Q8N4C9 275 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 ST8SIA2Q92186 375 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 SUCNR1Q9BXA5 334 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 SLC25A32Q9H2D1 315 aa19.77■□□□□ 0.76
VPS16-201ENST00000380443 ZNF629Q9UEG4 869 aaPredicted RBP19.77■□□□□ 0.76
VPS16-201ENST00000380443 KIR2DS1A0A191URI9 304 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 IFNA21P01568 189 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 KIR2DS4P43632 304 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 RBM39Q14498 530 aaKnown RBP19.76■□□□□ 0.75
VPS16-201ENST00000380443 KIR2DS1Q14954 304 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 ACSF3Q4G176 576 aaPredicted RBP19.76■□□□□ 0.75
VPS16-201ENST00000380443 BRICD5Q6PL45 260 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 FAM185AQ8N0U4 392 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 GCNT2Q8N0V5 402 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 CCDC71LQ8N9Z2 235 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 POC1AQ8NBT0 407 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 NAA60Q9H7X0 242 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 Q9N2K0 584 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 DNAJB11Q9UBS4 358 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 CHD8Q9HCK8 2581 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 TRBV6-6A0A0A6YYG2 114 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 LRP5LA4QPB2 252 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 ADAP1O75689 374 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 IL32P24001 234 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 HERV-K104P61576 105 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 IL15RAQ13261 267 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 FAM76BQ5HYJ3 339 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 C1orf174Q8IYL3 243 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 LRTM2Q8N967 370 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 C9orf106Q8NAJ2 232 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 DYRK2Q92630 601 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 ARPC5LQ9BPX5 153 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 RNF126Q9BV68 326 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 WDR13Q9H1Z4 485 aa19.76■□□□□ 0.75
VPS16-201ENST00000380443 PIGPP57054 158 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 THOC7Q6I9Y2 204 aaKnown RBP19.75■□□□□ 0.75
VPS16-201ENST00000380443 ALKAL2Q6UX46 152 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 FAM58AQ8N1B3 248 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 CNEP1R1Q8N9A8 125 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 BHLHE23Q8NDY6 225 aa19.75■□□□□ 0.75
VPS16-201ENST00000380443 RSRP1Q9BUV0 290 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms