RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 GNRH1P01148 92 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF154Q13106 437 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 SPIN3Q5JUX0 258 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 NOXO1Q8NFA2 376 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 GPR87Q9BY21 358 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 GAB2Q9UQC2 676 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 A8MWP6 167 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 RRP8O43159 456 aaKnown RBP13.8□□□□□ -0.2
CKAP4-201ENST00000378026 HLA-HP01893 362 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 BTF3P20290 206 aaKnown RBP13.8□□□□□ -0.2
CKAP4-201ENST00000378026 FGF8P55075 233 aaPredicted RBP13.8□□□□□ -0.2
CKAP4-201ENST00000378026 SLC25A24Q6NUK1 477 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 TMEM92Q6UXU6 159 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 TMEM252Q8N6L7 170 aa13.8□□□□□ -0.2
CKAP4-201ENST00000378026 PROB1E7EW31 1015 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 HSPB1P04792 205 aaKnown RBP13.79□□□□□ -0.2
CKAP4-201ENST00000378026 PGA3P0DJD8 388 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 TNFRSF4P43489 277 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 LCN15Q6UWW0 184 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 OR14J1Q9UGF5 321 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 ADAMTS9Q9P2N4 1935 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 CD55P08174 381 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 MMP7P09237 267 aaPredicted RBP13.79□□□□□ -0.2
CKAP4-201ENST00000378026 ALDH3B1P43353 468 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 PIGYQ3MUY2 71 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF506Q5JVG8 444 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 OR4D5Q8NGN0 318 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 OR1N1Q8NGS0 311 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 OR13D1Q8NGV5 346 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 SYT3Q9BQG1 590 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 TM2D1Q9BX74 207 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 OBP2AQ9NY56 170 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 LRFN1Q9P244 771 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 UBE2J1Q9Y385 318 aaPredicted RBP13.79□□□□□ -0.2
CKAP4-201ENST00000378026 IGKV3D-11A0A0A0MRZ8 115 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.79□□□□□ -0.2
CKAP4-201ENST00000378026 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.79□□□□□ -0.2
CKAP4-201ENST00000378026 CLDN34H7C241 214 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 FGF7P21781 194 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 CAPZBP47756 277 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 ARL6IP1Q15041 203 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 OR2AE1Q8NHA4 323 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
CKAP4-201ENST00000378026 Q96M66 194 aa13.79□□□□□ -0.2
CKAP4-201ENST00000378026 AMBPP02760 352 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 AADACP22760 399 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 HERV-K104P61576 105 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 C21orf62-AS1Q17RA5 79 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 THNSL2Q86YJ6 484 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 NEU1Q99519 415 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 KLRF1Q9NZS2 232 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 MMACHCQ9Y4U1 282 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 TCRBV21S2A2A0A5A6 115 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 OR2J2O76002 312 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 NR2C1P13056 603 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 HNF4GQ14541 408 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF695Q8IW36 515 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 OR4X1Q8NH49 305 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 NAT6Q93015 286 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 WFIKKN1Q96NZ8 548 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 ZNF665Q9H7R5 613 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 PLEKHF2Q9H8W4 249 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 ALKBH4Q9NXW9 302 aa13.78□□□□□ -0.2
CKAP4-201ENST00000378026 ADAM20O43506 726 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 CCL1P22362 96 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 JOSD1Q15040 202 aaPredicted RBP13.77□□□□□ -0.2
CKAP4-201ENST00000378026 DDA1Q9BW61 102 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 DECR2Q9NUI1 292 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 KLHL13Q9P2N7 655 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 PITPNC1Q9UKF7 332 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 RALGAPA1Q6GYQ0 2036 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 THADAQ6YHU6 1953 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 UNC13CQ8NB66 2214 aa13.77□□□□□ -0.2
CKAP4-201ENST00000378026 C3orf85A0A1B0GTC6 90 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 ANKUB1A6NFN9 424 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 PITX3O75364 302 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 DHRS3O75911 302 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 TMEM50AO95807 157 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 PNLIPP16233 465 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 ZNF133P52736 654 aaPredicted RBP13.77□□□□□ -0.21
CKAP4-201ENST00000378026 COL10A1Q03692 680 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 DEFB119Q8N690 84 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 LRRC61Q9BV99 259 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 MRPL37Q9BZE1 423 aaKnown RBP13.77□□□□□ -0.21
CKAP4-201ENST00000378026 TP53TG5Q9Y2B4 290 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 TLE4Q04727 773 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 C17orf67Q0P5P2 114 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 CLN3Q13286 438 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 OR5R1Q8NH85 324 aa13.77□□□□□ -0.21
CKAP4-201ENST00000378026 IFNL4K9M1U5 179 aa13.76□□□□□ -0.21
CKAP4-201ENST00000378026 GUCA1AP43080 201 aaPredicted RBP13.76□□□□□ -0.21
CKAP4-201ENST00000378026 ARL4DP49703 201 aa13.76□□□□□ -0.21
CKAP4-201ENST00000378026 NUTF2P61970 127 aaKnown RBP13.76□□□□□ -0.21
CKAP4-201ENST00000378026 C9orf50Q5SZB4 431 aa13.76□□□□□ -0.21
CKAP4-201ENST00000378026 COL13A1Q5TAT6 717 aaPredicted RBP13.76□□□□□ -0.21
CKAP4-201ENST00000378026 ST8SIA1Q92185 356 aa13.76□□□□□ -0.21
CKAP4-201ENST00000378026 BADQ92934 168 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms