RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 SLITRK2Q9H156 845 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 LINC00312Q9Y6C7 94 aa13.71□□□□□ -0.21
HMGN4-201ENST00000377575 EFCAB10A6NFE3 127 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 ANKRD65E5RJM6 399 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 SIRPB1O00241 398 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 PSPNO60542 156 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 OR2H2O95918 312 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 CALCBP10092 127 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 SOX2P48431 317 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 ZP1P60852 638 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 RELBQ01201 579 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 OLFML2AQ68BL7 652 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 XAF1Q6GPH4 301 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 CHST4Q8NCG5 386 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 OR52N4Q8NGI2 321 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 TMEM106AQ96A25 262 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 GPER1Q99527 375 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 DCLRE1BQ9H816 532 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 BABAM2Q9NXR7 383 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 CNOT2Q9NZN8 540 aaKnown RBP13.7□□□□□ -0.22
HMGN4-201ENST00000377575 NBEAL1Q6ZS30 2694 aa13.7□□□□□ -0.22
HMGN4-201ENST00000377575 CLPSL1A2RUU4 121 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 FUOMA2VDF0 154 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 GNAO1P09471 354 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 IGHV1-8P0DP01 117 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 ZNF44P15621 663 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 ERP29P30040 261 aaKnown RBP13.69□□□□□ -0.22
HMGN4-201ENST00000377575 OR3A1P47881 315 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 MTNR1BP49286 362 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 PPP3R1P63098 170 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 AANATQ16613 207 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 LRRC75BQ2VPJ9 315 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 ZNF529Q6P280 563 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 CRIP3Q6Q6R5 217 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 TCF23Q7RTU1 214 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 RNF144BQ7Z419 303 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 TRAPPC6BQ86SZ2 158 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 OR4S1Q8NGB4 309 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 GGHQ92820 318 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 TAS2R4Q9NYW5 299 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 ZNF281Q9Y2X9 895 aa13.69□□□□□ -0.22
HMGN4-201ENST00000377575 MEX3AA1L020 520 aaKnown RBP13.68□□□□□ -0.22
HMGN4-201ENST00000377575 H3BUX3 64 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 OGG1O15527 345 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 CLPXO76031 633 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 ARG1P05089 322 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 TGFBR2P37173 567 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 P2RX3P56373 397 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 TAS2R43P59537 309 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 ST3GAL4Q11206 333 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 SATL1Q86VE3 508 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 TPRX1Q8N7U7 411 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 PXT1Q8NFP0 134 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 TNFAIP8L1Q8WVP5 186 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 C17orf50Q8WW18 174 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 WFDC12Q8WWY7 111 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 FOXRED1Q96CU9 486 aaPredicted RBP13.68□□□□□ -0.22
HMGN4-201ENST00000377575 SSX3Q99909 188 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 FAM192AQ9GZU8 254 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 MEGF9Q9H1U4 602 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 CLEC2DQ9UHP7 191 aa13.68□□□□□ -0.22
HMGN4-201ENST00000377575 UBE2J1Q9Y385 318 aaPredicted RBP13.68□□□□□ -0.22
HMGN4-201ENST00000377575 TBL2Q9Y4P3 447 aaKnown RBP13.68□□□□□ -0.22
HMGN4-201ENST00000377575 GABRPO00591 440 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 MYL12BO14950 172 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 CSN2P05814 226 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 LMO1P25800 156 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 YIF1BQ5BJH7 314 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 ELP2Q6IA86 826 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 STX19Q8N4C7 294 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 OR51A2Q8NGJ7 313 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 FBLIM1Q8WUP2 373 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 PPA2Q9H2U2 334 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 GAL3ST2Q9H3Q3 398 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 RAB18Q9NP72 206 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 CKLFQ9UBR5 152 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 SESN1Q9Y6P5 492 aa13.67□□□□□ -0.22
HMGN4-201ENST00000377575 TRGV10A0A0A0MS01 117 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 ODF3BA8MYP8 253 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 DEGS1O15121 323 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 XPNPEP2O43895 674 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 LALBAP00709 142 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 ALDOBP05062 364 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 SCN1BQ07699 218 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 RSU1Q15404 277 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 DDI2Q5TDH0 399 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 ZNF626Q68DY1 528 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 DMKNQ6E0U4 476 aaPredicted RBP13.66□□□□□ -0.22
HMGN4-201ENST00000377575 AHSA2Q719I0 299 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 OR11H6Q8NGC7 330 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 GHSRQ92847 366 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 AJUBAQ96IF1 538 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 ZNF696Q9H7X3 374 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 TMEM138Q9NPI0 162 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 PLCXD1Q9NUJ7 323 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 PSORS1C1Q9UIG5 152 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 RNF114Q9Y508 228 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
HMGN4-201ENST00000377575 KIAA2026Q5HYC2 2103 aa13.66□□□□□ -0.22
HMGN4-201ENST00000377575 A0A0G2JK05 382 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms