RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 FAM213BQ8TBF2 198 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 EMG1Q92979 244 aaKnown RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 TMEM54Q969K7 222 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 PRRX2Q99811 253 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 PPP1R14DQ9NXH3 145 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 MRPS17Q9Y2R5 130 aaKnown RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 U3KQA8 63 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 SERPINE3A8MV23 424 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 IGFBP4P22692 258 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 PTGER4P35408 488 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 PCP4P48539 62 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 CSNK1A1P48729 337 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 ASCL1P50553 236 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 RAB4BP61018 213 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 UBE2KP61086 200 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 HIST1H3AP68431 136 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 HIST2H3PS2Q5TEC6 136 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 GJC3Q8NFK1 279 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 SNX22Q96L94 193 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 NDUFAF3Q9BU61 184 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 SLC25A31Q9H0C2 315 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 FAM86C1Q9NVL1 165 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 C19orf25Q9UFG5 118 aaPredicted RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 CFAP54Q96N23 3096 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 FCGR2AP12318 317 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 PNLIPP16233 465 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 OTX1P32242 354 aaPredicted RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 ZNF133P52736 654 aaPredicted RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 DLK1P80370 383 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 RSPO4Q2I0M5 234 aaPredicted RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 CDCP2Q5VXM1 449 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 HAS2Q92819 552 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 SHDQ96IW2 340 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 ZNF385AQ96PM9 386 aaKnown RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 ABHD14AQ9BUJ0 271 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 MCTS1Q9ULC4 181 aaKnown RBP12.04□□□□□ -0.48
SF1-205ENST00000377394 TMED3Q9Y3Q3 217 aa12.04□□□□□ -0.48
SF1-205ENST00000377394 WDFY3Q8IZQ1 3526 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 A0A087WZY1 265 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 CA11O75493 328 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 DEDDO75618 318 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 IL18BPO95998 194 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 GZMBP10144 247 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 CHRFAM7AQ494W8 412 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 MRPL14Q6P1L8 145 aaKnown RBP12.03□□□□□ -0.48
SF1-205ENST00000377394 TMEM182Q6ZP80 229 aaPredicted RBP12.03□□□□□ -0.48
SF1-205ENST00000377394 PP6455Q8WZ26 134 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
SF1-205ENST00000377394 SIRT7Q9NRC8 400 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 PIGLQ9Y2B2 252 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 ELOA3CA0A087WX78 387 aaPredicted RBP12.03□□□□□ -0.48
SF1-205ENST00000377394 C9J4A7 227 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 MSTNO14793 375 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 XRCC2O43543 280 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 CELA2AP08217 269 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 C6orf201Q7Z4U5 140 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 LRRC18Q8N456 261 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 PIGTQ969N2 578 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 CCDC74BQ96LY2 380 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 PBDC1Q9BVG4 233 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 DDA1Q9BW61 102 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 OR14J1Q9UGF5 321 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 KCNIP3Q9Y2W7 256 aa12.03□□□□□ -0.48
SF1-205ENST00000377394 IGHV3-15A0A0B4J1V0 119 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 DHRS7CA6NNS2 312 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 GEMIN2O14893 280 aaKnown RBP12.02□□□□□ -0.48
SF1-205ENST00000377394 MBP02144 154 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 DBHP09172 617 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 LMO1P25800 156 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 PCOLCEQ15113 449 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 PLXDC2Q6UX71 529 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 TMEM123Q8N131 208 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 SPEM1Q8N4L4 309 aa12.02□□□□□ -0.48
SF1-205ENST00000377394 ZNF705GA8MUZ8 300 aaPredicted RBP12.02□□□□□ -0.49
SF1-205ENST00000377394 TP53I11O14683 189 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 ZNF25P17030 456 aaPredicted RBP12.02□□□□□ -0.49
SF1-205ENST00000377394 CEACAM6P40199 344 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 CD200P41217 278 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 GUCA1AP43080 201 aaPredicted RBP12.02□□□□□ -0.49
SF1-205ENST00000377394 RGS19P49795 217 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 DNLZQ5SXM8 178 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 M1APQ8TC57 530 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 SNHG12Q9BXW3 62 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 ARV1Q9H2C2 271 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 ZNF701Q9NV72 531 aaPredicted RBP12.02□□□□□ -0.49
SF1-205ENST00000377394 MEMO1Q9Y316 297 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 RTTNQ86VV8 2226 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 EML6Q6ZMW3 1958 aa12.02□□□□□ -0.49
SF1-205ENST00000377394 HSD17B6O14756 317 aa12.01□□□□□ -0.49
SF1-205ENST00000377394 RRP8O43159 456 aaKnown RBP12.01□□□□□ -0.49
SF1-205ENST00000377394 SEC11BP0C7V7 166 aa12.01□□□□□ -0.49
SF1-205ENST00000377394 PPA1Q15181 289 aa12.01□□□□□ -0.49
SF1-205ENST00000377394 OR5R1Q8NH85 324 aa12.01□□□□□ -0.49
SF1-205ENST00000377394 MRPL24Q96A35 216 aaKnown RBP12.01□□□□□ -0.49
SF1-205ENST00000377394 UCN2Q96RP3 112 aa12.01□□□□□ -0.49
SF1-205ENST00000377394 HDHD3Q9BSH5 251 aaPredicted RBP12.01□□□□□ -0.49
SF1-205ENST00000377394 C14orf166Q9Y224 244 aaKnown RBP12.01□□□□□ -0.49
SF1-205ENST00000377394 CDRT15L2A8MXV6 281 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms