RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 IGKV3D-11A0A0A0MRZ8 115 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 H0YL77 283 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 CST4P01036 141 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 CYCSP99999 105 aaKnown RBP13.59□□□□□ -0.23
FXN-201ENST00000377270 CFHR1Q03591 330 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 NSDHLQ15738 373 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 LINC01590Q5TEZ4 76 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 ZNF627Q7L945 461 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 DNAJA3Q96EY1 480 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 REEP6Q96HR9 211 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 UBE2ZQ9H832 354 aaPredicted RBP13.59□□□□□ -0.23
FXN-201ENST00000377270 SRA1Q9HD15 236 aaKnown RBP13.59□□□□□ -0.23
FXN-201ENST00000377270 RXFP3Q9NSD7 469 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 OR6C3Q9NZP0 311 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
FXN-201ENST00000377270 C17orf51A8MQB3 221 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 RAB27BO00194 218 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 UPK3AO75631 287 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 TRAPPC6AO75865 159 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 FOLR1P15328 257 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 KLK2P20151 261 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 CX3CR1P49238 355 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 PRR27Q6MZM9 219 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 ZDHHC22Q8N966 263 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 LRRC75AQ8NAA5 344 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 OR2M7Q8NG81 312 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 OR6C1Q96RD1 312 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 LPAR4Q99677 370 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 MRPL13Q9BYD1 178 aaKnown RBP13.59□□□□□ -0.23
FXN-201ENST00000377270 RBKSQ9H477 322 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 MRPS17Q9Y2R5 130 aaKnown RBP13.59□□□□□ -0.23
FXN-201ENST00000377270 TMED7Q9Y3B3 224 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 PAM16Q9Y3D7 125 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
FXN-201ENST00000377270 TRAV30A0A087WSZ9 112 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 IGHV2OR16-5A0A0B4J2B6 119 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 GALR2O43603 387 aaPredicted RBP13.58□□□□□ -0.24
FXN-201ENST00000377270 DUS4LO95620 317 aaKnown RBP13.58□□□□□ -0.24
FXN-201ENST00000377270 ASAH2BP0C7U1 165 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 IL12BP29460 328 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 LGALS7P47929 136 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 ADAM8P78325 824 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 HLA-DQA1Q5Y7H0 255 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 FAM180AQ6UWF9 173 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 BHLHA15Q7RTS1 189 aaPredicted RBP13.58□□□□□ -0.24
FXN-201ENST00000377270 MARCH3Q86UD3 253 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 PLXDC1Q8IUK5 500 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 ST6GALNAC3Q8NDV1 305 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 PBDC1Q9BVG4 233 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 MRPL22Q9NWU5 206 aaKnown RBP13.58□□□□□ -0.24
FXN-201ENST00000377270 ZNF319Q9P2F9 582 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 OR4C45A6NMZ5 311 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 FBLP22087 321 aaKnown RBP13.58□□□□□ -0.24
FXN-201ENST00000377270 ZNF117Q03924 483 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 BHLHE23Q8NDY6 225 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 OR51F2Q8NH61 342 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 OR5AC2Q9NZP5 309 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 SMPXQ9UHP9 88 aa13.58□□□□□ -0.24
FXN-201ENST00000377270 A0A1B0GV50 99 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 VSTM2BA6NLU5 285 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 C9orf172C9J069 976 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 H7C1C5 153 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 WDR1O75083 606 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 NUDT14O95848 222 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 KNG1P01042 644 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 BIDP55957 195 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 LCN6P62502 163 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 RPL18Q07020 188 aaKnown RBP13.57□□□□□ -0.24
FXN-201ENST00000377270 SPOCK1Q08629 439 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 C9orf40Q8IXQ3 194 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 OR10AC1Q8NH08 325 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 ZNF479Q96JC4 524 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 AQP10Q96PS8 301 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 OR11A1Q9GZK7 315 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 MAGT1Q9H0U3 335 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 MRM2Q9UI43 246 aaKnown RBP13.57□□□□□ -0.24
FXN-201ENST00000377270 RP1P56715 2156 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 A0A1B0GV72 72 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 SLC17A2O00624 439 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 DUX1O43812 170 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 FBXO45P0C2W1 286 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 SLC25A1P53007 311 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 RANP62826 216 aaKnown RBP13.57□□□□□ -0.24
FXN-201ENST00000377270 RBPJQ06330 500 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 SAMD13Q5VXD3 122 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 ZNF676Q8N7Q3 588 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 MOB3AQ96BX8 217 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 RARRES2Q99969 163 aa13.57□□□□□ -0.24
FXN-201ENST00000377270 CABIN1Q9Y6J0 2220 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 A0A1B0GTH9 108 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 H3BSH0 61 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 LYL1P12980 280 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 AKR1C4P17516 323 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 CXCR1P25024 350 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 SLC6A8P48029 635 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 ARRB1P49407 418 aaPredicted RBP13.56□□□□□ -0.24
FXN-201ENST00000377270 PRSS54Q6PEW0 395 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 TOMM20LQ6UXN7 152 aa13.56□□□□□ -0.24
FXN-201ENST00000377270 SLC16A9Q7RTY1 509 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms