RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 PSPNO60542 156 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 FBXO24O75426 580 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 CALCBP10092 127 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 DYNLT3P51808 116 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 SLC34A1Q06495 639 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 ALKBH1Q13686 389 aaKnown RBP16.96■□□□□ 0.31
VSX1-201ENST00000376707 ZNF146Q15072 292 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 SPIN3Q5JUX0 258 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 MINOS1Q5TGZ0 78 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 TRAPPC6BQ86SZ2 158 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 Q8N2B8 174 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 OR51A4Q8NGJ6 313 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 OR10AC1Q8NH08 325 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 NDNFQ8TB73 568 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 ZNF649Q9BS31 505 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 ALG8Q9BVK2 526 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 PRSS22Q9GZN4 317 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 INPP5EQ9NRR6 644 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 SERTAD4Q9NUC0 356 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 MRPS18AQ9NVS2 196 aaKnown RBP16.96■□□□□ 0.31
VSX1-201ENST00000376707 FAM118AQ9NWS6 357 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 MYRFQ9Y2G1 1151 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 MINOS1-NBL1R4GNA1 71 aa16.96■□□□□ 0.31
VSX1-201ENST00000376707 DSCAML1Q8TD84 2053 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 IGHV2-26A0A0B4J1V2 119 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 G3V4G9 280 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 PEX14O75381 377 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 FADS2O95864 444 aaKnown RBP16.95■□□□□ 0.3
VSX1-201ENST00000376707 MT-ND2P03891 347 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 RPSAP08865 295 aaKnown RBP16.95■□□□□ 0.3
VSX1-201ENST00000376707 RAB40BQ12829 278 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 ARSJQ5FYB0 599 aaPredicted RBP16.95■□□□□ 0.3
VSX1-201ENST00000376707 LHFPL3Q86UP9 236 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 LYG1Q8N1E2 194 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 OR4S1Q8NGB4 309 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 OPALINQ96PE5 141 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 CLEC7AQ9BXN2 247 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 TMEM133Q9H2Q1 129 aa16.95■□□□□ 0.3
VSX1-201ENST00000376707 SIRPB1O00241 398 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 ERP29P30040 261 aaKnown RBP16.94■□□□□ 0.3
VSX1-201ENST00000376707 OR3A1P47881 315 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 P2RX3P56373 397 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 MRPL28Q13084 256 aaKnown RBP16.94■□□□□ 0.3
VSX1-201ENST00000376707 PDZK1IP1Q13113 114 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 NSUN5P1Q3KNT7 163 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 OR13C3Q8NGS6 347 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 RFT1Q96AA3 541 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 ISG20L2Q9H9L3 353 aaKnown RBP16.94■□□□□ 0.3
VSX1-201ENST00000376707 HMG20AQ9NP66 347 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 AMBNQ9NP70 447 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 EXOSC4Q9NPD3 245 aaKnown RBP16.94■□□□□ 0.3
VSX1-201ENST00000376707 ERVK13-1Q9NX77 482 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 GSTK1Q9Y2Q3 226 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 UBE2J1Q9Y385 318 aaPredicted RBP16.94■□□□□ 0.3
VSX1-201ENST00000376707 PCDHGB5Q9Y5G0 923 aa16.94■□□□□ 0.3
VSX1-201ENST00000376707 H3BUI4 141 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 SH2D1BO14796 132 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 ALX3O95076 343 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 CD28P10747 220 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 JUNBP17275 347 aaPredicted RBP16.93■□□□□ 0.3
VSX1-201ENST00000376707 BEAN1Q3B7T3 259 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 OR13C9Q8NGT0 318 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 APH1BQ8WW43 257 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 OR5M11Q96RB7 305 aa16.93■□□□□ 0.3
VSX1-201ENST00000376707 RPL36Q9Y3U8 105 aaKnown RBP16.93■□□□□ 0.3
VSX1-201ENST00000376707 TRGV10A0A0A0MS01 117 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 FUOMA2VDF0 154 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 ZFPL1O95159 310 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 HTR1DP28221 377 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 EMX1Q04741 257 aaPredicted RBP16.92■□□□□ 0.3
VSX1-201ENST00000376707 IL18R1Q13478 541 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 SAMD5Q5TGI4 173 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 OR52I1Q8NGK6 324 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 RDH12Q96NR8 316 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 GAL3ST2Q9H3Q3 398 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 RHOFQ9HBH0 211 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 NEK6Q9HC98 313 aa16.92■□□□□ 0.3
VSX1-201ENST00000376707 PRKDCP78527 4128 aaKnown RBP16.92■□□□□ 0.3
VSX1-201ENST00000376707 IGKV1-12A0A0C4DH73 117 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 TMEM212A6NML5 194 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 MMP23AO75900 390 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 KDM4BO94953 1096 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 OR2H2O95918 312 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 IGKV1D-12P01611 117 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 ALDOBP05062 364 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 BLCAPP62952 87 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 KLHL22Q53GT1 634 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 PRAMEF5Q5TYX0 476 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 OR52W1Q6IF63 320 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 NDUFA11Q86Y39 141 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 SAXO1Q8IYX7 474 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 PARP16Q8N5Y8 322 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 OR5D18Q8NGL1 313 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 HAVCR2Q8TDQ0 301 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 SPACA5Q96QH8 159 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 JAM3Q9BX67 310 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 ZCCHC4Q9H5U6 513 aa16.91■□□□□ 0.3
VSX1-201ENST00000376707 E9PI62 339 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 CCDC159P0C7I6 412 aa16.9■□□□□ 0.3
VSX1-201ENST00000376707 ZNF44P15621 663 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms