RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PCDHB16Q9NRJ7 776 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 RBFOX1Q9NWB1 397 aaKnown RBP11.87□□□□□ -0.51
HDAC6-204ENST00000376643 HHLA2Q9UM44 414 aa11.87□□□□□ -0.51
HDAC6-204ENST00000376643 DAPL1A0PJW8 107 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 ENTPD6O75354 484 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 DUS4LO95620 317 aaKnown RBP11.86□□□□□ -0.51
HDAC6-204ENST00000376643 IGHA1P01876 353 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 MT-ND2P03891 347 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 CSN2P05814 226 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 HTR1AP08908 422 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 PF4V1P10720 104 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 CD33P20138 364 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 BCL3P20749 454 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 MNDAP41218 407 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 PRRX1P54821 245 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 LOXL3P58215 753 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 BDH1Q02338 343 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 MRPL28Q13084 256 aaKnown RBP11.86□□□□□ -0.51
HDAC6-204ENST00000376643 PDZK1IP1Q13113 114 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 HABP2Q14520 560 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-204ENST00000376643 KPNB1Q14974 876 aaKnown RBP11.86□□□□□ -0.51
HDAC6-204ENST00000376643 HEPN1Q6WQI6 88 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 TCF23Q7RTU1 214 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 ABHD12Q8N2K0 398 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 PRSS35Q8N3Z0 413 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 OR4D6Q8NGJ1 314 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 MRAPQ8TCY5 172 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 HAVCR2Q8TDQ0 301 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 WIPF2Q8TF74 440 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-204ENST00000376643 EME1Q96AY2 570 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 CITED2Q99967 270 aaPredicted RBP11.86□□□□□ -0.51
HDAC6-204ENST00000376643 MMP28Q9H239 520 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 HMG20AQ9NP66 347 aa11.86□□□□□ -0.51
HDAC6-204ENST00000376643 F8VVB4 439 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 F8VWA3 439 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 H3BSH0 61 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 TOR1AO14656 332 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 SLC16A6O15403 523 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 PSPNO60542 156 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 INMTO95050 263 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 APOL3O95236 402 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 DBTP11182 482 aaKnown RBP11.85□□□□□ -0.51
HDAC6-204ENST00000376643 ZNF44P15621 663 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 CD34P28906 385 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 PTGFRP43088 359 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OR3A1P47881 315 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 TP53I3Q53FA7 332 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 SLC25A30Q5SVS4 291 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 CENPVQ7Z7K6 275 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-204ENST00000376643 AMIGO2Q86SJ2 522 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OR5AU1Q8NGC0 362 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OR52N4Q8NGI2 321 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OR4P4Q8NGL7 312 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OR13C3Q8NGS6 347 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 CORO2AQ92828 525 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 FGGYQ96C11 551 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 GPR61Q9BZJ8 451 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 COMMD4Q9H0A8 199 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 OAZ3Q9UMX2 235 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 GSTK1Q9Y2Q3 226 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 AMMECR1Q9Y4X0 333 aaPredicted RBP11.85□□□□□ -0.51
HDAC6-204ENST00000376643 CMYA5Q8N3K9 4069 aa11.85□□□□□ -0.51
HDAC6-204ENST00000376643 PLXNB1O43157 2135 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 KDM4BO94953 1096 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 OR2F2O95006 317 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 OR2H2O95918 312 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 PF4P02776 101 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 LMO1P25800 156 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 KIR3DL2P43630 455 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 SLC35A2P78381 396 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 ZNF85Q03923 595 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 ACBD7Q8N6N7 88 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 TPRX1Q8N7U7 411 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 ADAT3Q96EY9 351 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-204ENST00000376643 OR5M11Q96RB7 305 aa11.84□□□□□ -0.51
HDAC6-204ENST00000376643 TSSC4Q9Y5U2 329 aaPredicted RBP11.84□□□□□ -0.51
HDAC6-204ENST00000376643 IGKV1-9A0A0C4DH69 117 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 MEX3AA1L020 520 aaKnown RBP11.83□□□□□ -0.52
HDAC6-204ENST00000376643 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-204ENST00000376643 SIRPB1O00241 398 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 ALX3O95076 343 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 FAM106CPP0CH98 169 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 CDK2P24941 298 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 DUSP1P28562 367 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 NPBWR2P48146 333 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 SNRPGP62308 76 aaKnown RBP11.83□□□□□ -0.52
HDAC6-204ENST00000376643 BLCAPP62952 87 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 CD83Q01151 205 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 LDLRAD2Q5SZI1 272 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 Q6ZPA2 131 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 C10orf67Q8IYJ2 551 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 RDH10Q8IZV5 341 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 LYG1Q8N1E2 194 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 ZNF565Q8N9K5 539 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 OR5D14Q8NGL3 314 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 RNFT2Q96EX2 444 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 HRASLS5Q96KN8 279 aa11.83□□□□□ -0.52
HDAC6-204ENST00000376643 RBM14Q96PK6 669 aaKnown RBP11.83□□□□□ -0.52
HDAC6-204ENST00000376643 OCSTAMPQ9BR26 566 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms