RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 SPTY2D1-AS1A0A0U1RR47 76 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 K7N7A8 449 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 GPR137BO60478 399 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BKO60814 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BJP06899 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 CA3P07451 260 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 FAHP16930 419 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 ZNF43P17038 809 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 EN2P19622 333 aaPredicted RBP10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BOP23527 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BBP33778 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BDP58876 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BCP62807 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 TMEM187Q14656 261 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST2H2BEQ16778 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 LHFPL4Q7Z7J7 247 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 ZNF283Q8N7M2 679 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 OR5L1Q8NGL2 311 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BHQ93079 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BNQ99877 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 HIST1H2BMQ99879 126 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 METTL7AQ9H8H3 244 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 P4HTMQ9NXG6 502 aa10.03□□□□□ -0.8
TM9SF2-201ENST00000376387 CNTRLQ7Z7A1 2325 aa10.02□□□□□ -0.8
TM9SF2-201ENST00000376387 TCRBV21S2A2A0A5A6 115 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 FCGR2AP12318 317 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 S100A2P29034 98 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 CSNK1A1P48729 337 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 CLRN1P58418 232 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 GAMTQ14353 236 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 SURF2Q15527 256 aaPredicted RBP10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 VN1R1Q9GZP7 353 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 NELFAQ9H3P2 528 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 KLHL13Q9P2N7 655 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 ASCC3Q8N3C0 2202 aaKnown RBP10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 ASXL3Q9C0F0 2248 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 LIPT2A6NK58 231 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 HSD17B6O14756 317 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 OR5H8P0DN80 308 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 RBX1P62877 108 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 TMEM176BQ3YBM2 270 aaPredicted RBP10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 SPSB3Q6PJ21 355 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 FAM180AQ6UWF9 173 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 CPEB2Q7Z5Q1 589 aaKnown RBP10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 NEK7Q8TDX7 302 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 NUDT11Q96G61 164 aa10.02□□□□□ -0.81
TM9SF2-201ENST00000376387 SHANK1Q9Y566 2161 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 TRGC2P03986 189 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 OMGP23515 440 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 RND3P61587 244 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 RAB1AP62820 205 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 IL24Q13007 206 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 ZNF441Q8N8Z8 693 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 OR1N1Q8NGS0 311 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 GALNT14Q96FL9 552 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 PBDC1Q9BVG4 233 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 PLEKHJ1Q9NW61 149 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 PARPBPQ9NWS1 579 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 LIPGQ9Y5X9 500 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 NSG1A0A0A6YYJ2 146 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 A0A1W2PNR3 127 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 FAM24AA6NFZ4 105 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 SLC33A1O00400 549 aaPredicted RBP10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 ANGPTL7O43827 346 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 KHDC3LQ587J8 217 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 ZNF610Q8N9Z0 462 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 RTN4IP1Q8WWV3 396 aaPredicted RBP10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 ANXA10Q9UJ72 324 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 CCDC187A0A096LP49 1063 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 RBFOX3A6NFN3 312 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 DBHP09172 617 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 PGA4P0DJD7 388 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 PGA3P0DJD8 388 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 GABRG2P18507 467 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 SUCLG1P53597 346 aaKnown RBP10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 DLK1P80370 383 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 MYBPHQ13203 477 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 SUMF1Q8NBK3 374 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 STT3BQ8TCJ2 826 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 NAA60Q9H7X0 242 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 SEPSECSQ9HD40 501 aaKnown RBP10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 HIF1ANQ9NWT6 349 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 COPS7AQ9UBW8 275 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 HS3ST3A1Q9Y663 406 aa10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 COL5A1P20908 1838 aaPredicted RBP10.01□□□□□ -0.81
TM9SF2-201ENST00000376387 SPAG17Q6Q759 2223 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 CYB5BO43169 146 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 TGOLN2O43493 480 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 ONECUT2O95948 504 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 CCL1P22362 96 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 ARL6IP1Q15041 203 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 FBXW12Q6X9E4 464 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 DOK3Q7L591 496 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 CACNG8Q8WXS5 425 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 KCNIP3Q9Y2W7 256 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 TNFSF12-TNFSF13A0A0A6YY99 330 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 ZNF726A6NNF4 738 aa10□□□□□ -0.81
TM9SF2-201ENST00000376387 ZNF850A8MQ14 1090 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms