RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 DEFA6Q01524 100 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 UNQ6494/PRO21346Q6UXR6 183 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 TMEM251Q8N6I4 163 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 OR5H2Q8NGV7 314 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 OR8U1Q8NH10 309 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 MED13Q9UHV7 2174 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 IGKV1-27A0A075B6S5 117 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 SPRY1O43609 319 aaPredicted RBP12.11□□□□□ -0.47
MSH5-202ENST00000375740 AMY2BP19961 511 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 NPY4RP50391 375 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 PLGLB1Q02325 96 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 ACTBL2Q562R1 376 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 RPL7L1Q6DKI1 246 aaKnown RBP12.11□□□□□ -0.47
MSH5-202ENST00000375740 FAHD2BQ6P2I3 314 aaPredicted RBP12.11□□□□□ -0.47
MSH5-202ENST00000375740 TUSC5Q8IXB3 177 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 ZNF383Q8NA42 475 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
MSH5-202ENST00000375740 SPSB1Q96BD6 273 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 FAHD2AQ96GK7 314 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 C14orf144Q96I85 54 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 TMPRSS5Q9H3S3 457 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 CALHM2Q9HA72 323 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 TREM2Q9NZC2 230 aa12.11□□□□□ -0.47
MSH5-202ENST00000375740 FBXO24O75426 580 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 ZNF708P17019 499 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 GABRR1P24046 479 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 SNU13P55769 128 aaKnown RBP12.1□□□□□ -0.47
MSH5-202ENST00000375740 ARF1P84077 181 aaKnown RBP12.1□□□□□ -0.47
MSH5-202ENST00000375740 ZNF92Q03936 586 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 C9orf135Q5VTT2 229 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 ARRDC1Q8N5I2 433 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 CPEB3Q8NE35 698 aaKnown RBP12.1□□□□□ -0.47
MSH5-202ENST00000375740 TRBV6-7A0A0A0MS04 114 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 A0A1W2PPE2 198 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 SYNGR4O95473 234 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 FAM3AP98173 230 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 C6orf201Q7Z4U5 140 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 CSNK2A3Q8NEV1 391 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 TOLLIPQ9H0E2 274 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 METTL9Q9H1A3 318 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
MSH5-202ENST00000375740 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
MSH5-202ENST00000375740 SLC34A2O95436 690 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 NRASP01111 189 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 SP1P08047 785 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 NDUFB7P17568 137 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 BTF3P20290 206 aaKnown RBP12.09□□□□□ -0.47
MSH5-202ENST00000375740 OR3A2P47893 321 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 RAB2AP61019 212 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 CNN3Q15417 329 aaKnown RBP12.09□□□□□ -0.47
MSH5-202ENST00000375740 IL22RA1Q8N6P7 574 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 FNDC9Q8TBE3 224 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 LINC00470Q9BZP3 86 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 A0A096LPE4 126 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 CXorf65A6NEN9 183 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 SERPINE3A8MV23 424 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 M0R036 132 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 SPEM2Q0P670 501 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 RSU1Q15404 277 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 ATP1A1-AS1Q5TC04 95 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 OR13G1Q8NGZ3 307 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 SLAMF9Q96A28 289 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 Q96M66 194 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 FER1L6-AS2Q96M78 137 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 PRRG4Q9BZD6 226 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 C5orf66Q9H5L9 145 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 PLEKHJ1Q9NW61 149 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 PARPBPQ9NWS1 579 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 AMDHD2Q9Y303 409 aa12.09□□□□□ -0.47
MSH5-202ENST00000375740 hCG_38984A0A1B0GV85 526 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 DUS4LO95620 317 aaKnown RBP12.08□□□□□ -0.48
MSH5-202ENST00000375740 CSTBP04080 98 aaKnown RBP12.08□□□□□ -0.48
MSH5-202ENST00000375740 EDN3P14138 238 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 GLP1RP43220 463 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 RBP2P50120 134 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 MEOX1P50221 254 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
MSH5-202ENST00000375740 TMEM42Q69YG0 159 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 BORCS8Q96FH0 119 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 RGCCQ9H4X1 137 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 ZNF391Q9UJN7 358 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 MCTS1Q9ULC4 181 aaKnown RBP12.08□□□□□ -0.48
MSH5-202ENST00000375740 KMT2EQ8IZD2 1858 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 ZNF587BE7ETH6 402 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 ZNHIT1O43257 154 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 PI3P19957 117 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 TAS2R31P59538 309 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 ARL6IP1Q15041 203 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 C3AR1Q16581 482 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 NRN1LQ496H8 165 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 PIGCQ92535 297 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 TMEM230Q96A57 120 aa12.08□□□□□ -0.48
MSH5-202ENST00000375740 EHFQ9NZC4 300 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms