RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 OR2W1Q9Y3N9 320 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 ARID1AO14497 2285 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TNFSF14O43557 240 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 IL11RAQ14626 422 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 HLA-DRB5Q30154 266 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 DOLPP1Q86YN1 238 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 TBC1D29Q9UFV1 150 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 NPTNQ9Y639 398 aa9.05□□□□□ -0.96
PTCH1-204ENST00000375290 H0Y980 276 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 CXCL12P48061 93 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 YBX1P67809 324 aaKnown RBP9.04□□□□□ -0.96
PTCH1-204ENST00000375290 RHBDD1Q8TEB9 315 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 HES4Q9HCC6 221 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OOEPA6NGQ2 149 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 PPYP01298 95 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 CXCL10P02778 98 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 DANCRP0C864 163 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 DAOP14920 347 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 BCL3P20749 454 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR3A1P47881 315 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 CLDN2P57739 230 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR2M7Q8NG81 312 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 ASB16Q96NS5 453 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 PARP12Q9H0J9 701 aaKnown RBP9.04□□□□□ -0.96
PTCH1-204ENST00000375290 FGF22Q9HCT0 170 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 HCFC2Q9Y5Z7 792 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR2T8A6NH00 312 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 HBZP02008 142 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF25P17030 456 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR2I1PQ8NGU4 316 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 TSPAN32Q96QS1 320 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM30AQ9NV96 361 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 SCN3AQ9NY46 2000 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 EDDM3BP56851 147 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR5I1Q13606 314 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 DEFB133Q30KQ1 61 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 C1orf100Q5SVJ3 147 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 ST6GALNAC2Q9UJ37 374 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR51B4Q9Y5P0 310 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF236Q9UL36 1845 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 RPS11P62280 158 aaKnown RBP eCLIP9.04□□□□□ -0.96
PTCH1-204ENST00000375290 TRIM61Q5EBN2 209 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 ZNF468Q5VIY5 522 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-204ENST00000375290 SLC25A33Q9BSK2 321 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 CACNG5Q9UF02 275 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 IL19Q9UHD0 177 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 LINC01553A4QN01 128 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM210A6NLX4 147 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 FFAR1O14842 300 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 KCNAB1Q14722 419 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 TMEM183AQ8IXX5 376 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 COX14Q96I36 57 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 FABP2P12104 132 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 IFITM2Q01629 132 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 OR10X1Q8NGY0 326 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 SBF2Q86WG5 1849 aa9.04□□□□□ -0.96
PTCH1-204ENST00000375290 LINC00469Q8N7U9 141 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 OR1L6Q8NGR2 347 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 UBALD1Q8TB05 177 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 WBP2Q969T9 261 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 FRRS1LQ9P0K9 344 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PPP1R3CQ9UQK1 317 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CST7O76096 145 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 HTR1DP28221 377 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 G6PCP35575 357 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 TAS2R60P59551 318 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 EWSR1Q01844 656 aaKnown RBP eCLIP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 ATG4DQ86TL0 474 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 OR6C1Q96RD1 312 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CORTO00230 105 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PLPP3O14495 311 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CRYAAP02489 173 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PPP2CBP62714 309 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PPP2CAP67775 309 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 ANKRD34AQ69YU3 496 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 MRPL30Q8TCC3 161 aaKnown RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 FOXN4Q96NZ1 517 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 FAM173AQ9BQD7 235 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 HCFC1R1Q9NWW0 138 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PRNDQ9UKY0 176 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 HPXP02790 462 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PPOXP50336 477 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 FBXO46Q6PJ61 603 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 RAB33BQ9H082 229 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CRYABP02511 175 aaKnown RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 STAG3L3P0CL85 134 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 GZMHP20718 246 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 EPHA8P29322 1005 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 WDR31Q8NA23 367 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 NAGKQ9UJ70 344 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 PMELP40967 661 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 ZP4Q12836 540 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 FOXB1Q99853 325 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 C20orf141Q9NUB4 165 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 CFDP00746 253 aaPredicted RBP9.03□□□□□ -0.96
PTCH1-204ENST00000375290 EMDP50402 254 aa9.03□□□□□ -0.96
PTCH1-204ENST00000375290 UCP3P55916 312 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms