RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 DLX2Q07687 328 aaPredicted RBP9.06□□□□□ -0.96
CD28-202ENST00000374481 RPEL1Q2QD12 228 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 ZNF260Q3ZCT1 412 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 ZNF793Q6ZN11 406 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 TGIF2LYQ8IUE0 185 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 MKXQ8IYA7 352 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 KREMEN2Q8NCW0 462 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 IFI44Q8TCB0 444 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 STARD5Q9NSY2 213 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 TMEM106BQ9NUM4 274 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 DAPP1Q9UN19 280 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 TMED7-TICAM2A0A0A6YYA0 188 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 KIR2DS1A0A191URI9 304 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 PITX3O75364 302 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 TNFSF13O75888 250 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 SLC25A6P12236 298 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 MDH2P40926 338 aaKnown RBP9.06□□□□□ -0.96
CD28-202ENST00000374481 KIR2DS4P43632 304 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 KIR2DS1Q14954 304 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 C10orf91Q5T1B1 145 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 CDC20BQ86Y33 519 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 OR10G4Q8NGN3 311 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 PTX4Q96A99 478 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 P2RX4Q99571 388 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 EGLN1Q9GZT9 426 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 S1PR5Q9H228 398 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 C3orf85A0A1B0GTC6 90 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 ZNF117Q03924 483 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 FUT5Q11128 374 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.06□□□□□ -0.96
CD28-202ENST00000374481 C19orf35Q6ZS72 473 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 BPIFA4PQ86YQ2 179 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 TMEM252Q8N6L7 170 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 KISS1RQ969F8 398 aaPredicted RBP9.06□□□□□ -0.96
CD28-202ENST00000374481 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
CD28-202ENST00000374481 PAGE4O60829 102 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 CDS2O95674 445 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 SELPP16109 830 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 FLT3LGP49771 235 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 GPM6BQ13491 265 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 GGTLC2Q14390 218 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 COX19Q49B96 90 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 C6orf201Q7Z4U5 140 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 FAM173AQ9BQD7 235 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 CYTL1Q9NRR1 136 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 RNF186Q9NXI6 227 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 FOCADQ5VW36 1801 aa9.06□□□□□ -0.96
CD28-202ENST00000374481 A0A1W2PR80 420 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 C9JQL5 133 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 LY75O60449 1722 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 TUSC2O75896 110 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 SLC35E2P0CK97 266 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 GCH1P30793 250 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 MLF2Q15773 248 aaPredicted RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 DLK2Q6UY11 383 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 MRPL52Q86TS9 123 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 MESP1Q9BRJ9 268 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 FBXO34Q9NWN3 711 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 PEF1Q9UBV8 284 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 YTHDF2Q9Y5A9 579 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 HS3ST3B1Q9Y662 390 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 FGF17O60258 216 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 SYNGR4O95473 234 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 CLEC3BP05452 202 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 GALNSP34059 522 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 PPOXP50336 477 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 ERVK-16P61578 105 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 RPS4XP62701 263 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 SRSF5Q13243 272 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 CCL14Q16627 93 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 SNAI3Q3KNW1 292 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 OR1N1Q8NGS0 311 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 CD99L2Q8TCZ2 262 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 MRGPRDQ8TDS7 321 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 TMEM170AQ8WVE7 144 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 NUDT16L1Q9BRJ7 211 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 PRRG4Q9BZD6 226 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 MRPS2Q9Y399 296 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 TEX50A0A1B0GTY4 177 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 A0A1W2PRS3 328 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 TMEM229AB2RXF0 380 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 UMODP07911 640 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 CTSSP25774 331 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 OR3A4PP47883 348 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 SLC38A11Q08AI6 406 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 CATR1Q13166 79 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 CADM4Q8NFZ8 388 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 TXNIPQ9H3M7 391 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 MCTS1Q9ULC4 181 aaKnown RBP9.05□□□□□ -0.96
CD28-202ENST00000374481 ADAMTSL1Q8N6G6 1762 aa9.05□□□□□ -0.96
CD28-202ENST00000374481 NKX2-6A6NCS4 301 aa9.04□□□□□ -0.96
CD28-202ENST00000374481 H0YGG7 62 aa9.04□□□□□ -0.96
CD28-202ENST00000374481 ISLRO14498 428 aa9.04□□□□□ -0.96
CD28-202ENST00000374481 NPIPB7O75200 414 aa9.04□□□□□ -0.96
CD28-202ENST00000374481 COMPP49747 757 aaPredicted RBP9.04□□□□□ -0.96
CD28-202ENST00000374481 KIR2DS3Q14952 304 aa9.04□□□□□ -0.96
CD28-202ENST00000374481 UNQ5815/PRO19632Q6UWF5 114 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms