RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 MGMTP16455 207 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 PRSS3P35030 304 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 EFNB2P52799 333 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 ACTBP60709 375 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 FGF12P61328 243 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 ACTG1P63261 375 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 MRPS11P82912 194 aaKnown RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 TATDN3Q17R31 274 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 ZNF787Q6DD87 383 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 HIST2H2BCQ6DN03 193 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 OSR2Q8N2R0 312 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 LILRB2Q8N423 598 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 GCSAMQ8N6F7 178 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 TMEM59Q9BXS4 323 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 RNF7Q9UBF6 113 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 MTFP1Q9UDX5 166 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 ZNF107Q9UII5 783 aaPredicted RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 DSCAMO60469 2012 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 CRYBG3Q68DQ2 2970 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 CHD3Q12873 2000 aaKnown RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 TRAV18A0A075B6X5 111 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 MPIG6BO95866 241 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 BTCP35070 178 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 RAB25P57735 213 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 RPS27AP62979 156 aaKnown RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 RNASE12Q5GAN4 147 aaKnown RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 NHLRC3Q5JS37 347 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 BTN2A1Q7KYR7 527 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 TGIF2LYQ8IUE0 185 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 BATF2Q8N1L9 274 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 OR51T1Q8NGJ9 327 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 EMG1Q92979 244 aaKnown RBP12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 UPRTQ96BW1 309 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 LIME1Q9H400 295 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 BANF2Q9H503 90 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 TMEM106BQ9NUM4 274 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 RASL12Q9NYN1 266 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 NPTNQ9Y639 398 aa12.32□□□□□ -0.44
SMPDL3B-201ENST00000373888 FBN2P35556 2912 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 NXPH2O95156 264 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 TCRBP04435 133 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 CHRM2P08172 466 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 IRF2P14316 349 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 EGR1P18146 543 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 BTF3P20290 206 aaKnown RBP12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 GLRA1P23415 457 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 EIF2B2P49770 351 aaKnown RBP12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 ACP7Q6ZNF0 438 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 BIVMQ86UB2 503 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 C1orf87Q8N0U7 546 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 CCL17Q92583 94 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 POM121Q96HA1 1249 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 Q96M66 194 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 URM1Q9BTM9 101 aaKnown RBP12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 TM2D1Q9BX74 207 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 WDR13Q9H1Z4 485 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 HRASLSQ9HDD0 168 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 TREM2Q9NZC2 230 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 TANC2Q9HCD6 1990 aa12.31□□□□□ -0.44
SMPDL3B-201ENST00000373888 TMEM178BH3BS89 294 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 WNT9BO14905 357 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 CYB5R3P00387 301 aaPredicted RBP12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 F12P00748 615 aaPredicted RBP12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 LPLP06858 475 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 PRKACAP17612 351 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 RBMXP38159 391 aaKnown RBP12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 EFNA4P52798 201 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 RBM11P57052 281 aaKnown RBP12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 KRTAP10-9P60411 292 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 HOXA4Q00056 320 aaPredicted RBP12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 HFEQ30201 348 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 SMIM21Q3B7S5 101 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A1Q86YD7 464 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM89BQ8N5H3 189 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 OR56B4Q8NH76 319 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 SVIPQ8NHG7 77 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 RDH5Q92781 318 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 DLL4Q9NR61 685 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 ZNF701Q9NV72 531 aaPredicted RBP12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 IL36RNQ9UBH0 155 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 ST3GAL6Q9Y274 331 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 ALG5Q9Y673 324 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 CENPEQ02224 2701 aa12.3□□□□□ -0.44
SMPDL3B-201ENST00000373888 A0A0A6YYD4 124 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A10PA6NDY2 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A18PA6NE21 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A16PA6NEW6 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A20PA6NIJ5 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A8PA6NJQ4 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A7PA6NKC0 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A22PA8MWA6 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A12PA8MX19 464 aa12.29□□□□□ -0.44
SMPDL3B-201ENST00000373888 FAM90A5PA8MXJ8 464 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms