RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 FBXL17Q9UF56 701 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 PRSS50Q9UI38 385 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 ZNF391Q9UJN7 358 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 DEDDO75618 318 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 MBPP02686 304 aaPredicted RBP20.48■□□□□ 0.87
CDK9-201ENST00000373264 ESPL1Q14674 2120 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 B4GALT7Q9UBV7 327 aa20.48■□□□□ 0.87
CDK9-201ENST00000373264 TMEM218A2RU14 115 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 CDK2AP1O14519 115 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 FUT3P21217 361 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 LPAR6P43657 344 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 RAB1AP62820 205 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 GLYATL2Q8WU03 294 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 TAF9BQ9HBM6 251 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 ZNF286AQ9HBT8 521 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 MTCH1Q9NZJ7 389 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 AMDHD2Q9Y303 409 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 PCNX2A6NKB5 2137 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 BOD1L1Q8NFC6 3051 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 PQLC2LA1A4F0 135 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 K7EPK0 472 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 SYNGR4O95473 234 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 MT-CO3P00414 261 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 PET100P0DJ07 73 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 TSC22D1Q15714 1073 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 STK11Q15831 433 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 HIKESHIQ53FT3 197 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 FAM71E2Q8N5Q1 922 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 DNAJB11Q9UBS4 358 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 TUBD1Q9UJT1 453 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 MEMO1Q9Y316 297 aa20.47■□□□□ 0.87
CDK9-201ENST00000373264 AGPAT2O15120 278 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 SYNGR1O43759 233 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 TMEM33P57088 247 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 EXTL1Q92935 676 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 TP53RKQ96S44 253 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 PRRX2Q99811 253 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 DEFB127Q9H1M4 99 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 LPAR3Q9UBY5 353 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 IFNA21P01568 189 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 ECI1P42126 302 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 MEOX1P50221 254 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 TMEM88Q6PEY1 159 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 MEX3BQ6ZN04 569 aaKnown RBP20.46■□□□□ 0.87
CDK9-201ENST00000373264 MRPL21Q7Z2W9 205 aaKnown RBP20.46■□□□□ 0.87
CDK9-201ENST00000373264 PUSL1Q8N0Z8 303 aaKnown RBP20.46■□□□□ 0.87
CDK9-201ENST00000373264 ARHGAP21Q5T5U3 1957 aa20.46■□□□□ 0.87
CDK9-201ENST00000373264 ZNF732B4DXR9 585 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 M0R296 226 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 TNFSF15O95150 251 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 ZNF169Q14929 603 aaPredicted RBP20.45■□□□□ 0.86
CDK9-201ENST00000373264 TGIF1Q15583 401 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 TMEM164Q5U3C3 297 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 APH1AQ96BI3 265 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 LINC00470Q9BZP3 86 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 NKX6-2Q9C056 277 aaPredicted RBP20.45■□□□□ 0.86
CDK9-201ENST00000373264 LAMA5O15230 3695 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 BET1O15155 118 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 PHF1O43189 567 aaPredicted RBP20.45■□□□□ 0.86
CDK9-201ENST00000373264 ATG12O94817 140 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 SCTP09683 121 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 MOB3AQ96BX8 217 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 MSI2Q96DH6 328 aaKnown RBP20.45■□□□□ 0.86
CDK9-201ENST00000373264 GPR87Q9BY21 358 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 GLS2Q9UI32 602 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 ZDHHC8Q9ULC8 765 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 KCNIP3Q9Y2W7 256 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 DMXL1Q9Y485 3027 aa20.45■□□□□ 0.86
CDK9-201ENST00000373264 RAB19A4D1S5 217 aa20.44■□□□□ 0.86
CDK9-201ENST00000373264 RNFT1Q5M7Z0 435 aa20.44■□□□□ 0.86
CDK9-201ENST00000373264 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.44■□□□□ 0.86
CDK9-201ENST00000373264 TLNRD1Q9H1K6 362 aa20.44■□□□□ 0.86
CDK9-201ENST00000373264 ASCL1P50553 236 aa20.44■□□□□ 0.86
CDK9-201ENST00000373264 SPATA46Q5T0L3 261 aa20.44■□□□□ 0.86
CDK9-201ENST00000373264 ARL11Q969Q4 196 aa20.44■□□□□ 0.86
CDK9-201ENST00000373264 TSNAXQ99598 290 aaKnown RBP20.44■□□□□ 0.86
CDK9-201ENST00000373264 MED6O75586 246 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 PPYP01298 95 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 HES3Q5TGS1 186 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 TTC28Q96AY4 2481 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 MED12LQ86YW9 2145 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 RPL36A-HNRNPH2H7BZ11 118 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 WNT5AP41221 380 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 PLA2G2CQ5R387 149 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 TMPRSS7Q7RTY8 843 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 CCDC36Q8IYA8 594 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 C17orf78Q8N4C9 275 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 GALNT14Q96FL9 552 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 C18orf12Q96KH6 178 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 POM121L2Q96KW2 1035 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 WFDC1Q9HC57 220 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 TREM1Q9NP99 234 aa20.43■□□□□ 0.86
CDK9-201ENST00000373264 C21orf140B9A014 251 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 SP1P08047 785 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 HERPUD1Q15011 391 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 TMEM268Q5VZI3 342 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 LIAT1Q6ZQX7 453 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 ZDHHC23Q8IYP9 409 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 NBEAQ8NFP9 2946 aa20.42■□□□□ 0.86
CDK9-201ENST00000373264 PRR14LQ5THK1 2151 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms