RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 S100A8P05109 93 aa9.21□□□□□ -0.93
NUP188-201ENST00000372577 HOXD4P09016 255 aaPredicted RBP9.21□□□□□ -0.93
NUP188-201ENST00000372577 GNB1P62873 340 aa9.21□□□□□ -0.93
NUP188-201ENST00000372577 SLC38A11Q08AI6 406 aa9.21□□□□□ -0.93
NUP188-201ENST00000372577 OR13D1Q8NGV5 346 aa9.21□□□□□ -0.93
NUP188-201ENST00000372577 WDR13Q9H1Z4 485 aa9.21□□□□□ -0.93
NUP188-201ENST00000372577 TMEM231Q9H6L2 316 aa9.21□□□□□ -0.93
NUP188-201ENST00000372577 AMMECR1Q9Y4X0 333 aaPredicted RBP9.21□□□□□ -0.93
NUP188-201ENST00000372577 TRAF3IP2O43734 574 aaPredicted RBP9.21□□□□□ -0.94
NUP188-201ENST00000372577 OR7C2O60412 319 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 KRASP01116 189 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 PATE4P0C8F1 98 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 P2RX3P56373 397 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 UBE2G2P60604 165 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 MGAT2Q10469 447 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 SSX2Q16385 188 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 SFTPA2Q8IWL1 248 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 ZPLD1Q8TCW7 415 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 UCN2Q96RP3 112 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 TMPRSS13Q9BYE2 586 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 OPN4Q9UHM6 478 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 SIRT4Q9Y6E7 314 aaPredicted RBP9.21□□□□□ -0.94
NUP188-201ENST00000372577 UBE2L5PA0A1B0GUS4 154 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 COX7A2P2O60397 106 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 CDS2O95674 445 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 FBP1P09467 338 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 OR5G3P0C626 314 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 VDAC1P21796 283 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 CD200P41217 278 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 MITD1Q8WV92 249 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 FBXO17Q96EF6 278 aa9.21□□□□□ -0.94
NUP188-201ENST00000372577 IGLV1-36A0A0B4J1U3 117 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 XKRY2A2RUG3 117 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 AQP7O14520 342 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 PGA4P0DJD7 388 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 INPP5JQ15735 1006 aaPredicted RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 HFEQ30201 348 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 AARDQ4LEZ3 155 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 SLC25A47Q6Q0C1 308 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 OR4A4PQ8NGN8 299 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 OR10AC1Q8NH08 325 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 CABLES2Q9BTV7 478 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 KLHDC2Q9Y2U9 406 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 SIP14410 1827 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 RPL36A-HNRNPH2H7BZ11 118 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 GZMHP20718 246 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 ZNF90Q03938 601 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 MIDNQ504T8 468 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 ZNF574Q6ZN55 896 aaPredicted RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 ADAT3Q96EY9 351 aaPredicted RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 PGLYRP3Q96LB9 341 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 PDCD11Q14690 1871 aaKnown RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 TRAV38-1A0A0B4J264 116 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 DHRS7CA6NNS2 312 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 ATP6V1G2-DDX39BF2Z307 99 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 SFTA3P0C7M3 94 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 ARL16Q0P5N6 197 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 ZNF345Q14585 488 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 VAX1Q5SQQ9 334 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FDX2Q6P4F2 183 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 CLRN3Q8NCR9 226 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 TTTY12Q9BZ98 90 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 OTOFQ9HC10 1997 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 A0A0J9YW62 118 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 PATE3B3GLJ2 98 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 DEFA6Q01524 100 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 STPG2Q8N412 459 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 C9orf62Q8N4C0 152 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 OR5C1Q8NGR4 320 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 OR4S2Q8NH73 311 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 ABHD3Q8WU67 409 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 RPUSD4Q96CM3 377 aaKnown RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 ZNF251Q9BRH9 671 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 NUDT16L1Q9BRJ7 211 aaKnown RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 OR2D2Q9H210 308 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 PSG11Q9UQ72 335 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 URGCP-MRPS24S4R325 110 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 TRPM7Q96QT4 1865 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 TRBV5-7A0A0A0MS05 114 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A10PA6NDY2 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A18PA6NE21 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A16PA6NEW6 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A20PA6NIJ5 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A8PA6NJQ4 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A7PA6NKC0 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A22PA8MWA6 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A12PA8MX19 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A5PA8MXJ8 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A23PA8MXZ1 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 EFEMP2O95967 443 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A15PP0C7V4 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A13PP0C7W8 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A14PP0C7W9 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 FAM90A24PP0C7X0 464 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 SLC25A4P12235 298 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 C1orf100Q5SVJ3 147 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 UNQ9370/PRO34162Q6UXP9 181 aa9.2□□□□□ -0.94
NUP188-201ENST00000372577 CXorf67Q86X51 503 aaPredicted RBP9.2□□□□□ -0.94
NUP188-201ENST00000372577 VSTM2AQ8TAG5 236 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms