RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 DEDDO75618 318 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 UCP3P55916 312 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 HERV-K104P61576 105 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 TAGLNQ01995 201 aaKnown RBP24.87■■□□□ 1.57
SSBP3-204ENST00000371320 ZFP62Q8NB50 900 aaPredicted RBP24.87■■□□□ 1.57
SSBP3-204ENST00000371320 DEFB127Q9H1M4 99 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 LDAHQ9H6V9 325 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 K7EPK0 472 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 FGF12P61328 243 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 EIF5AP63241 154 aaKnown RBP24.87■■□□□ 1.57
SSBP3-204ENST00000371320 ATP1A1-AS1Q5TC04 95 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 PXDC1Q5TGL8 231 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 FAM71E2Q8N5Q1 922 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 C12orf49Q9H741 205 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 PRSS50Q9UI38 385 aa24.87■■□□□ 1.57
SSBP3-204ENST00000371320 LSM5Q9Y4Y9 91 aaKnown RBP24.87■■□□□ 1.57
SSBP3-204ENST00000371320 TSPAN4O14817 238 aa24.86■■□□□ 1.57
SSBP3-204ENST00000371320 AADACP22760 399 aa24.86■■□□□ 1.57
SSBP3-204ENST00000371320 RPL12P30050 165 aaKnown RBP24.86■■□□□ 1.57
SSBP3-204ENST00000371320 SPEM2Q0P670 501 aa24.86■■□□□ 1.57
SSBP3-204ENST00000371320 OR5T2Q8NGG2 359 aa24.86■■□□□ 1.57
SSBP3-204ENST00000371320 OR5L1Q8NGL2 311 aa24.86■■□□□ 1.57
SSBP3-204ENST00000371320 HIST1H2AAQ96QV6 131 aa24.86■■□□□ 1.57
SSBP3-204ENST00000371320 ZNF806P0C7X5 589 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 OR2A2Q6IF42 318 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 SIGLEC5O15389 551 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 SCGB1D2O95969 90 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 FAM157CP0CG43 387 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 RPL7L1Q6DKI1 246 aaKnown RBP24.85■■□□□ 1.57
SSBP3-204ENST00000371320 LIAT1Q6ZQX7 453 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 MKXQ8IYA7 352 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 LRTM2Q8N967 370 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 PRRX2Q99811 253 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 OPA3Q9H6K4 179 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 DNAJC13O75165 2243 aa24.85■■□□□ 1.57
SSBP3-204ENST00000371320 CD300LBA8K4G0 201 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 PRSS44E7EML9 344 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 TRAPPC2LH3BP13 241 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 BET1O15155 118 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 LRP3O75074 770 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 IGSF11Q5DX21 431 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 LYZL2Q7Z4W2 148 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 OR5A2Q8NGI9 324 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 OR11L1Q8NGX0 322 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 ARL11Q969Q4 196 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 HS3ST6Q96QI5 342 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 RSRP1Q9BUV0 290 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 ZNF552Q9H707 407 aaPredicted RBP24.84■■□□□ 1.57
SSBP3-204ENST00000371320 FAM86C1Q9NVL1 165 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 MTCH1Q9NZJ7 389 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 ARGFXA6NJG6 315 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 GLI4P10075 376 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 APLNRP35414 380 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 DEFA5Q01523 94 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 HIKESHIQ53FT3 197 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 CCDC71LQ8N9Z2 235 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 TAF9BQ9HBM6 251 aa24.84■■□□□ 1.57
SSBP3-204ENST00000371320 PPYP01298 95 aa24.83■■□□□ 1.57
SSBP3-204ENST00000371320 TGIF1Q15583 401 aa24.83■■□□□ 1.57
SSBP3-204ENST00000371320 ATRAIDQ6UW56 229 aa24.83■■□□□ 1.57
SSBP3-204ENST00000371320 LRRC46Q96FV0 321 aa24.83■■□□□ 1.57
SSBP3-204ENST00000371320 C18orf12Q96KH6 178 aa24.83■■□□□ 1.57
SSBP3-204ENST00000371320 PLSCR2Q9NRY7 297 aa24.83■■□□□ 1.57
SSBP3-204ENST00000371320 ZNF705EA8MWA4 302 aaPredicted RBP24.82■■□□□ 1.56
SSBP3-204ENST00000371320 TPD52L2O43399 206 aaKnown RBP24.82■■□□□ 1.56
SSBP3-204ENST00000371320 ARG2P78540 354 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 EIF5AL1Q6IS14 154 aaKnown RBP24.82■■□□□ 1.56
SSBP3-204ENST00000371320 LGI3Q8N145 548 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 GLYATL2Q8WU03 294 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 WDYHV1Q96HA8 205 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 LPAR3Q9UBY5 353 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 H7C1Q1 480 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 CLN3Q13286 438 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 Q6ZS49 121 aa24.82■■□□□ 1.56
SSBP3-204ENST00000371320 MSI2Q96DH6 328 aaKnown RBP24.82■■□□□ 1.56
SSBP3-204ENST00000371320 TRGV5A0A0B4J1U4 118 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 PHF1O43189 567 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-204ENST00000371320 IL18BPO95998 194 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 MBPP02686 304 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-204ENST00000371320 MPV17LQ2QL34 196 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 ZNF766Q5HY98 468 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 DPPA2Q7Z7J5 298 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 OR1K1Q8NGR3 316 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 Q9N2K0 584 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 IL36RNQ9UBH0 155 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 ANKRD30BLA7E2S9 258 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 NUDT19A8MXV4 375 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 CDK2AP1O14519 115 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 WNT5AP41221 380 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 OR5P3Q8WZ94 311 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 PLEKHA2Q9HB19 425 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 RCC2Q9P258 522 aaKnown RBP24.81■■□□□ 1.56
SSBP3-204ENST00000371320 SPRR3Q9UBC9 169 aa24.81■■□□□ 1.56
SSBP3-204ENST00000371320 FBXO9Q9UK97 447 aaPredicted RBP24.81■■□□□ 1.56
SSBP3-204ENST00000371320 SLC22A20A6NK97 555 aa24.8■■□□□ 1.56
SSBP3-204ENST00000371320 NAPSAO96009 420 aa24.8■■□□□ 1.56
SSBP3-204ENST00000371320 RCC1P18754 421 aaPredicted RBP24.8■■□□□ 1.56
SSBP3-204ENST00000371320 ARHGDIBP52566 201 aa24.8■■□□□ 1.56
SSBP3-204ENST00000371320 SRSF7Q16629 238 aaKnown RBP eCLIP24.8■■□□□ 1.56
SSBP3-204ENST00000371320 RNFT1Q5M7Z0 435 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms