RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 HMG20AQ9NP66 347 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 EXOSC4Q9NPD3 245 aaKnown RBP13.03□□□□□ -0.32
VMA21-202ENST00000370361 INPP5EQ9NRR6 644 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 FAM118AQ9NWS6 357 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 TAS2R3Q9NYW6 316 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 FRRS1LQ9P0K9 344 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 AASSQ9UDR5 926 aa13.03□□□□□ -0.32
VMA21-202ENST00000370361 TRGV10A0A0A0MS01 117 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 LOC100130705A0A1B0GUX0 176 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 VSIG10L2P0DP72 767 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 PRKACAP17612 351 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 HTR1DP28221 377 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 TCF23Q7RTU1 214 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 TRAPPC6BQ86SZ2 158 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 SYS1Q8N2H4 156 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 OR4F17Q8NGA8 305 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 RHOXF1Q8NHV9 184 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 NDNFQ8TB73 568 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 CORO2AQ92828 525 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
VMA21-202ENST00000370361 FGGYQ96C11 551 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 Q96MT0 163 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 RDH12Q96NR8 316 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 OR4F4Q96R69 305 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 COMMD4Q9H0A8 199 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 RBFOX1Q9NWB1 397 aaKnown RBP13.02□□□□□ -0.33
VMA21-202ENST00000370361 FOXJ3Q9UPW0 622 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 EXOGQ9Y2C4 368 aaKnown RBP13.02□□□□□ -0.33
VMA21-202ENST00000370361 SIGLEC9Q9Y336 463 aa13.02□□□□□ -0.33
VMA21-202ENST00000370361 TGP01266 2768 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 IGKV1-9A0A0C4DH69 117 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 PSPNO60542 156 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 KDM4BO94953 1096 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 IGHA1P01876 353 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 DBTP11182 482 aaKnown RBP13.01□□□□□ -0.33
VMA21-202ENST00000370361 BCL3P20749 454 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 LMO1P25800 156 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 BRS3P32247 399 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 CEACAM3P40198 252 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 KPRPQ5T749 579 aaPredicted RBP13.01□□□□□ -0.33
VMA21-202ENST00000370361 HEPN1Q6WQI6 88 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 OR52N4Q8NGI2 321 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 OR5D14Q8NGL3 314 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 OR13C3Q8NGS6 347 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 SERTAD4Q9NUC0 356 aa13.01□□□□□ -0.33
VMA21-202ENST00000370361 TMEM212A6NML5 194 aa13□□□□□ -0.33
VMA21-202ENST00000370361 FAM90A22PA8MWA6 464 aa13□□□□□ -0.33
VMA21-202ENST00000370361 H3BSH0 61 aa13□□□□□ -0.33
VMA21-202ENST00000370361 FADS2O95864 444 aaKnown RBP13□□□□□ -0.33
VMA21-202ENST00000370361 CCDC159P0C7I6 412 aa13□□□□□ -0.33
VMA21-202ENST00000370361 CD34P28906 385 aa13□□□□□ -0.33
VMA21-202ENST00000370361 OR3A1P47881 315 aa13□□□□□ -0.33
VMA21-202ENST00000370361 NPBWR2P48146 333 aa13□□□□□ -0.33
VMA21-202ENST00000370361 BDH1Q02338 343 aa13□□□□□ -0.33
VMA21-202ENST00000370361 SLC34A1Q06495 639 aa13□□□□□ -0.33
VMA21-202ENST00000370361 ALKBH1Q13686 389 aaKnown RBP13□□□□□ -0.33
VMA21-202ENST00000370361 GALEQ14376 348 aa13□□□□□ -0.33
VMA21-202ENST00000370361 ARSJQ5FYB0 599 aaPredicted RBP13□□□□□ -0.33
VMA21-202ENST00000370361 SERPINA12Q8IW75 414 aa13□□□□□ -0.33
VMA21-202ENST00000370361 RDH10Q8IZV5 341 aa13□□□□□ -0.33
VMA21-202ENST00000370361 DYNAPQ8N1N2 210 aa13□□□□□ -0.33
VMA21-202ENST00000370361 CAPSLQ8WWF8 208 aa13□□□□□ -0.33
VMA21-202ENST00000370361 LGALS12Q96DT0 336 aa13□□□□□ -0.33
VMA21-202ENST00000370361 WNT10AQ9GZT5 417 aa13□□□□□ -0.33
VMA21-202ENST00000370361 CHST6Q9GZX3 395 aa13□□□□□ -0.33
VMA21-202ENST00000370361 ZCCHC4Q9H5U6 513 aa13□□□□□ -0.33
VMA21-202ENST00000370361 SMPD3Q9NY59 655 aaPredicted RBP13□□□□□ -0.33
VMA21-202ENST00000370361 DPM3Q9P2X0 92 aa13□□□□□ -0.33
VMA21-202ENST00000370361 CMYA5Q8N3K9 4069 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 OR4C45A6NMZ5 311 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 OOSP1A8MZH6 123 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 OR2H2O95918 312 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 SAMD5Q5TGI4 173 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 CCBE1Q6UXH8 406 aaPredicted RBP12.99□□□□□ -0.33
VMA21-202ENST00000370361 PELI1Q96FA3 418 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 C4orf36Q96KX1 117 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 NCOR1P1Q9H4R4 102 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 LIN7BQ9HAP6 207 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 PCDHB16Q9NRJ7 776 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 OR6C3Q9NZP0 311 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 GSTK1Q9Y2Q3 226 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 HILPDAQ9Y5L2 63 aa12.99□□□□□ -0.33
VMA21-202ENST00000370361 LEUTXA8MZ59 168 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 J3QLW9 94 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 M0QZK8 103 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 SULT1B1O43704 296 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 ZNF19P17023 458 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 PAX6P26367 422 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 PTGFRP43088 359 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 VDAC2P45880 294 aaPredicted RBP12.98□□□□□ -0.33
VMA21-202ENST00000370361 MTNR1BP49286 362 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 NANOS3P60323 173 aaKnown RBP12.98□□□□□ -0.33
VMA21-202ENST00000370361 RAB40BQ12829 278 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 RCN1Q15293 331 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 LRRC36Q1X8D7 754 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 BEAN1Q3B7T3 259 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 PLA1AQ53H76 456 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 LDLRAD2Q5SZI1 272 aa12.98□□□□□ -0.33
VMA21-202ENST00000370361 TMEM219Q86XT9 240 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms