RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 BTNL3Q6UXE8 466 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 UNQ9370/PRO34162Q6UXP9 181 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 PRIMA1Q86XR5 153 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 Q8IYB0 196 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 FAM58AQ8N1B3 248 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 MS4A15Q8N5U1 240 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 TNFAIP8L1Q8WVP5 186 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
SMPDL3A-201ENST00000368440 MAS1P04201 325 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 NDUFB7P17568 137 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 COL10A1Q03692 680 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 TRAM1Q15629 374 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 SAXO1Q8IYX7 474 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 DCTN5Q9BTE1 182 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 MRI1Q9BV20 369 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 HMG20AQ9NP66 347 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 CKLFQ9UBR5 152 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 C2CD3Q4AC94 2353 aa12.46□□□□□ -0.42
SMPDL3A-201ENST00000368440 NAV3Q8IVL0 2385 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 FSHBP01225 129 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF93P35789 620 aaPredicted RBP12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 CAPZA1P52907 286 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 KLF17Q5JT82 389 aaPredicted RBP12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF561Q8N587 486 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZSCAN4Q8NAM6 433 aaPredicted RBP12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR10K1Q8NGX5 313 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 CCDC59Q9P031 241 aaKnown RBP12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 FOXJ3Q9UPW0 622 aa12.45□□□□□ -0.42
SMPDL3A-201ENST00000368440 ECDO95905 644 aaPredicted RBP12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 HAND1O96004 215 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 MAPK3P27361 379 aaPredicted RBP12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 FGF12P61328 243 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 PXT1Q8NFP0 134 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 CPNE2Q96FN4 548 aaPredicted RBP12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF737O75373 536 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 IL1AP01583 271 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 MYL9P24844 172 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 PTGFRP43088 359 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 RORCP51449 518 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 BMXP51813 675 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 ZNF146Q15072 292 aa12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 ASCC1Q8N9N2 400 aaKnown RBP12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 PNLDC1Q8NA58 520 aaKnown RBP12.44□□□□□ -0.42
SMPDL3A-201ENST00000368440 IGHV3OR16-10A0A075B7F0 116 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 TMEM82A0PJX8 343 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 GPR37O15354 613 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 TK1P04183 234 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 PPIAL4GP0DN37 164 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 MMP9P14780 707 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 ARF6P62330 175 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 PDCD1Q15116 288 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 C11orf91Q3C1V1 193 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 ASCL4Q6XD76 172 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 C17orf107Q6ZR85 190 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 LYPD6Q86Y78 171 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 C8orf46Q8TAG6 207 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 THRSPQ92748 146 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 SLC25A46Q96AG3 418 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 SIRPDQ9H106 197 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 C19orf12Q9NSK7 152 aa12.43□□□□□ -0.42
SMPDL3A-201ENST00000368440 K7N7A8 449 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 SIRPB1O00241 398 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 RGS5O15539 181 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 PSPNO60542 156 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 CHRM2P08172 466 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 UCHL1P09936 223 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 IGHV4-38-2P0DP08 117 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 GALP22466 123 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR10A3P58181 314 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 SPIN3Q5JUX0 258 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 FIP1L1Q6UN15 594 aaKnown RBP12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 LRRTM1Q86UE6 522 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 JAGN1Q8N5M9 183 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR4M1Q8NGD0 313 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 NANPQ8TBE9 248 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 UPRTQ96BW1 309 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 TBX15Q96SF7 602 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 PCGF1Q9BSM1 259 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 CHST6Q9GZX3 395 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 CNTD2Q9H8S5 307 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 ONECUT1Q9UBC0 465 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 ING4Q9UNL4 249 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 DSCAML1Q8TD84 2053 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 TRAV40A0A0B4J280 105 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 A0A1W2PP11 408 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR2H2O95918 312 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 LIPFP07098 398 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 DLX1P56177 255 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 ELP2Q6IA86 826 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 OR6Q1Q8NGQ2 317 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 WDFY2Q96P53 400 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 MMP27Q9H306 513 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 RHOFQ9HBH0 211 aa12.42□□□□□ -0.42
SMPDL3A-201ENST00000368440 CTDSP2O14595 271 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 TOX4O94842 621 aa12.41□□□□□ -0.42
SMPDL3A-201ENST00000368440 HTR3BO95264 441 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms