RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 FAM216BQ8N7L0 139 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 TMEM104Q8NE00 496 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 ANGPTL6Q8NI99 470 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 LGALS14Q8TCE9 139 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 NEK7Q8TDX7 302 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 ST8SIA4Q92187 359 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 SLC25A28Q96A46 364 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 MRPS24Q96EL2 167 aaKnown RBP10.56□□□□□ -0.72
EFNA1-201ENST00000368406 MRI1Q9BV20 369 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 RBM38Q9H0Z9 239 aaKnown RBP10.56□□□□□ -0.72
EFNA1-201ENST00000368406 DNTTIP1Q9H147 329 aa10.56□□□□□ -0.72
EFNA1-201ENST00000368406 ZNF701M0R085 212 aaPredicted RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 HSPB6O14558 160 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 GEMIN2O14893 280 aaKnown RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 OR2H2O95918 312 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 IGHV2-5P01817 119 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 CHRM2P08172 466 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 NDUFB7P17568 137 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 CFPP27918 469 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 PDCD1Q15116 288 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 FAM189A2Q15884 450 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 TAF9Q16594 264 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 PAN3Q58A45 887 aaKnown RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 MZT2AQ6P582 158 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 ZNF561Q8N587 486 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 CD177Q8N6Q3 437 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 PPP1R35Q8TAP8 253 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 H1FXQ92522 213 aaKnown RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 PHF21AQ96BD5 680 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 C1orf147Q96MC9 270 aaPredicted RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 GAFA1Q96PS6 74 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 DCUN1D5Q9BTE7 237 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 PATZ1Q9HBE1 687 aaKnown RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 CLN8Q9UBY8 286 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 RAB22AQ9UL26 194 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 ETV7Q9Y603 341 aa10.55□□□□□ -0.72
EFNA1-201ENST00000368406 FN1P02751 2386 aaKnown RBP10.55□□□□□ -0.72
EFNA1-201ENST00000368406 C2CD3Q4AC94 2353 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 SONP18583 2426 aaKnown RBP10.54□□□□□ -0.72
EFNA1-201ENST00000368406 METTL21EPA6NDL7 271 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 TMEM14DPA8MWL7 114 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 SIGLEC5O15389 551 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 TMEM127O75204 238 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 PAHP00439 452 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 CD37P11049 281 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 RIPPLY3P57055 190 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 LMO4P61968 165 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 RPS27AP62979 156 aaKnown RBP10.54□□□□□ -0.72
EFNA1-201ENST00000368406 UNC119Q13432 240 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 ZNF146Q15072 292 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 MPV17LQ2QL34 196 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 NHLRC3Q5JS37 347 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 NKAPLQ5M9Q1 402 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 ZNF788Q6ZQV5 615 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 CHST4Q8NCG5 386 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 ZNRF1Q8ND25 227 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 KCTD12Q96CX2 325 aaKnown RBP10.54□□□□□ -0.72
EFNA1-201ENST00000368406 MSI2Q96DH6 328 aaKnown RBP10.54□□□□□ -0.72
EFNA1-201ENST00000368406 NEDD4LQ96PU5 975 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 SSBP3Q9BWW4 388 aaPredicted RBP10.54□□□□□ -0.72
EFNA1-201ENST00000368406 CHST6Q9GZX3 395 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 ATG5Q9H1Y0 275 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 SPACA1Q9HBV2 294 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 LPAR2Q9HBW0 351 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 BATF3Q9NR55 127 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 ABRACLQ9P1F3 81 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 COMMD3Q9UBI1 195 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 SLC25A10Q9UBX3 287 aaPredicted RBP10.54□□□□□ -0.72
EFNA1-201ENST00000368406 OR5V1Q9UGF6 321 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 MALRD1Q5VYJ5 2156 aa10.54□□□□□ -0.72
EFNA1-201ENST00000368406 A0A1B0GW55 424 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 A8MV72 311 aaPredicted RBP10.53□□□□□ -0.72
EFNA1-201ENST00000368406 H3BUI4 141 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DVL1O14640 695 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L2P0CJ85 424 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L3P0CJ86 424 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L4P0CJ87 422 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L5P0CJ88 424 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L6P0CJ89 424 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L7P0CJ90 424 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 ZNF182P17025 639 aaPredicted RBP10.53□□□□□ -0.72
EFNA1-201ENST00000368406 RAB6AP20340 208 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 IL2RGP31785 369 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 NPY4RP50391 375 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 SCAND1P57086 179 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 EDDM3AQ14507 147 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 GRK1Q15835 563 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 ATPAF1Q5TC12 328 aaPredicted RBP10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
EFNA1-201ENST00000368406 METAP1DQ6UB28 335 aaPredicted RBP10.53□□□□□ -0.72
EFNA1-201ENST00000368406 GDPD3Q7L5L3 318 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 SAMD12Q8N8I0 201 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 LINC01356Q8N9X3 169 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 OR56B1Q8NGI3 324 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 ACOT12Q8WYK0 555 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 DGCR14Q96DF8 476 aaKnown RBP10.53□□□□□ -0.72
EFNA1-201ENST00000368406 SDSLQ96GA7 329 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 Q96M66 194 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 BARHL1Q9BZE3 327 aa10.53□□□□□ -0.72
EFNA1-201ENST00000368406 PPA2Q9H2U2 334 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms