RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SNCAP37840 140 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 CYB561P49447 251 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 GNMTQ14749 295 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 ZNF611Q8N823 705 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 C15orf54Q8N8G6 183 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 MAFAQ8NHW3 353 aaPredicted RBP12.33□□□□□ -0.44
CD48-201ENST00000368045 SPIN2AQ99865 258 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 SPIN2BQ9BPZ2 258 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 RNF122Q9H9V4 155 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 WFDC1Q9HC57 220 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 CACFD1Q9UGQ2 172 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 BOKQ9UMX3 212 aaPredicted RBP12.33□□□□□ -0.44
CD48-201ENST00000368045 DUXBA0A1W2PPF3 345 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 PQLC2LA1A4F0 135 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 FAM221AA4D161 298 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 MPPED1O15442 326 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
CD48-201ENST00000368045 TSPO2Q5TGU0 170 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 C6orf15Q6UXA7 325 aaPredicted RBP12.33□□□□□ -0.44
CD48-201ENST00000368045 SLC25A26Q70HW3 274 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 DPPA2Q7Z7J5 298 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 ZPBPQ9BS86 351 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 EML6Q6ZMW3 1958 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 KIAA1549Q9HCM3 1950 aa12.33□□□□□ -0.44
CD48-201ENST00000368045 TRIOO75962 3097 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 TRDCB7Z8K6 153 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 C9JQL5 133 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 MASP2O00187 686 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 AGPAT2O15120 278 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 PRKACAP17612 351 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 CAMLGP49069 296 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 FOXO1Q12778 655 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 MIDNQ504T8 468 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 BRICD5Q6PL45 260 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 LFNGQ8NES3 379 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 RXFP4Q8TDU9 374 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 EXTL1Q92935 676 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 TMEM56Q96MV1 263 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 EGLN1Q9GZT9 426 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 TMEM222Q9H0R3 208 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 C19orf12Q9NSK7 152 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 DEPPQ9NTK1 212 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 ZDHHC8Q9ULC8 765 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 RCL1Q9Y2P8 373 aaKnown RBP12.32□□□□□ -0.44
CD48-201ENST00000368045 NOSIPQ9Y314 301 aaKnown RBP12.32□□□□□ -0.44
CD48-201ENST00000368045 TMEM56-RWDD3S4R434 201 aa12.32□□□□□ -0.44
CD48-201ENST00000368045 PI4KAP42356 2102 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 A0A1B0GW64 132 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 MEX3AA1L020 520 aaKnown RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 CCDC85CA6NKD9 419 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 MRPL33O75394 65 aaKnown RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 CTXN2P0C2S0 81 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 LMO1P25800 156 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 PRSS12P56730 875 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 FGF12P61328 243 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 MPV17LQ2QL34 196 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 Q6ZPA2 131 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 CALHM1Q8IU99 346 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 SLC35G3Q8N808 338 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 CPEB3Q8NE35 698 aaKnown RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 OR52M1Q8NGK5 317 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 OR11L1Q8NGX0 322 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 ABHD3Q8WU67 409 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 HPSE2Q8WWQ2 592 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 BSCL2Q96G97 398 aaPredicted RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 PBDC1Q9BVG4 233 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 REPIN1Q9BWE0 567 aaKnown RBP12.31□□□□□ -0.44
CD48-201ENST00000368045 C11orf1Q9H5F2 150 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
CD48-201ENST00000368045 COLCA2A8K830 154 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 ZNF587BE7ETH6 402 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 ZNF205O95201 554 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 NAPSAO96009 420 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 TK1P04183 234 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 IFNA4P05014 189 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 CRYBA1P05813 215 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 NFYBP25208 207 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 RPS18P62269 152 aaKnown RBP12.3□□□□□ -0.44
CD48-201ENST00000368045 ZNF266Q14584 549 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 GUK1Q16774 197 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 CT55Q8WUE5 264 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 BOD1Q96IK1 185 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 AKR1E2Q96JD6 320 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 TP53RKQ96S44 253 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 FAM173AQ9BQD7 235 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 SCRT1Q9BWW7 348 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 SMDT1Q9H4I9 107 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 Q9N2K0 584 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 PIGBOS1A0A0B4J2F0 54 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 KIR2DS1A0A191URI9 304 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 PATE3B3GLJ2 98 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 LAMTOR5O43504 91 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 MMP9P14780 707 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 ACP1P24666 158 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 KIR2DS4P43632 304 aa12.3□□□□□ -0.44
CD48-201ENST00000368045 ID4P47928 161 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms