RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 MT-ND6P03923 174 aa11.1□□□□□ -0.63
TPR-201ENST00000367478 RIMKLAQ8IXN7 391 aa11.1□□□□□ -0.63
TPR-201ENST00000367478 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 CAPZBP47756 277 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 GAMTQ14353 236 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 OOEPA6NGQ2 149 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 HOXA6P31267 233 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 HTRA3P83110 453 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 MRGPREQ86SM8 312 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 MRAP2Q96G30 205 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 FBXL17Q9UF56 701 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 MIOXQ9UGB7 285 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 MYO16Q9Y6X6 1858 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 B3GALT4O96024 378 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 LIMK1P53667 647 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 ATOH1Q92858 354 aaPredicted RBP11.09□□□□□ -0.63
TPR-201ENST00000367478 GMPPAQ96IJ6 420 aaPredicted RBP11.09□□□□□ -0.63
TPR-201ENST00000367478 MED29Q9NX70 200 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 OR4C46A6NHA9 309 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 EPPINO95925 133 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 HPXP02790 462 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 ZNF273Q14593 569 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 PAQR6Q6TCH4 344 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 MUC20Q8N307 709 aaPredicted RBP11.09□□□□□ -0.63
TPR-201ENST00000367478 SAP30LQ9HAJ7 183 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 TMEM272A0A1B0GTI8 110 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 OR13H1Q8NG92 308 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 CRYGNQ8WXF5 182 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 FAM131CQ96AQ9 280 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 CDX2Q99626 313 aaPredicted RBP11.09□□□□□ -0.63
TPR-201ENST00000367478 DNAL4O96015 105 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 WNT3P56703 355 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 ST3GAL2Q16842 350 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 LNP1A1A4G5 178 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 FGF17O60258 216 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 SLC25A35Q3KQZ1 300 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 TBC1D29Q9UFV1 150 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 A0A1B0GV72 72 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 TRDCB7Z8K6 153 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 AWAT1Q58HT5 328 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 RNF165Q6ZSG1 346 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 SPPL3Q8TCT6 385 aa11.09□□□□□ -0.63
TPR-201ENST00000367478 DIRC3C9JPN6 131 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 CTDSPLO15194 276 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 SPRY1O43609 319 aaPredicted RBP11.08□□□□□ -0.64
TPR-201ENST00000367478 SPRY3O43610 288 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 CTAG2O75638 210 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 PCBP3P57721 371 aaKnown RBP11.08□□□□□ -0.64
TPR-201ENST00000367478 CEACAM16Q2WEN9 425 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 CA13Q8N1Q1 262 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 OR2V2Q96R30 315 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 FOXB1Q99853 325 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 HBZP02008 142 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 CCR2P41597 374 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 TMEM207Q6UWW9 146 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 SSX8Q7RTT4 187 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 SYT8Q8NBV8 401 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 GLULP15104 373 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 TMEM33P57088 247 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 ACVR1Q04771 509 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 TMEM211Q6ICI0 200 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 NT5CQ8TCD5 201 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 SCN5AQ14524 2016 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 CXCL13O43927 109 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 PTOV1Q86YD1 416 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 TRAV38-1A0A0B4J264 116 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 TCRBV5S2A0A599 114 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 UBE2L6O14933 153 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 SP6Q3SY56 376 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 ZBTB34Q8NCN2 500 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 PRNDQ9UKY0 176 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 CSN3P07498 182 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 OR4A8P0C604 315 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 SLC25A42Q86VD7 318 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 PSG11Q9UQ72 335 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 OR2W5A6NFC9 320 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 VDAC1P21796 283 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 GABRA6Q16445 453 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 GFRALQ6UXV0 394 aa11.08□□□□□ -0.64
TPR-201ENST00000367478 LINC00615Q96LM1 132 aaPredicted RBP11.08□□□□□ -0.64
TPR-201ENST00000367478 SLIRPQ9GZT3 109 aaKnown RBP11.08□□□□□ -0.64
TPR-201ENST00000367478 KLF3P57682 345 aaPredicted RBP11.07□□□□□ -0.64
TPR-201ENST00000367478 WDFY1Q8IWB7 410 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 OR8I2Q8N0Y5 310 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 C5P01031 1676 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 F11P03951 625 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 PABPC1L2AQ5JQF8 200 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 PPIHO43447 177 aaKnown RBP11.07□□□□□ -0.64
TPR-201ENST00000367478 ABLIM3O94929 683 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 TWIST1Q15672 202 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 UBE2V2Q15819 145 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 RAB1CQ92928 201 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 TXNDC17Q9BRA2 123 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 FAM206AQ9NX38 181 aa11.07□□□□□ -0.64
TPR-201ENST00000367478 CEP250Q9BV73 2442 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms