RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 NUPL2O15504 423 aaKnown RBP10.15□□□□□ -0.78
SYNE1-204ENST00000367248 NDUFB6O95139 128 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 TMED6Q8WW62 240 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 PSENENQ9NZ42 101 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 SERTM2A0A1B0GWG4 89 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 OR5H14A6NHG9 310 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 TXNDC12O95881 172 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 RAB7AP51149 207 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 CDH26Q8IXH8 852 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 PXT1Q8NFP0 134 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 MYOFQ9NZM1 2061 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 HOXA6P31267 233 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 AARDQ4LEZ3 155 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 YIPF5Q969M3 257 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 HSD17B10Q99714 261 aaKnown RBP10.15□□□□□ -0.78
SYNE1-204ENST00000367248 OR6C3Q9NZP0 311 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 GYPAP02724 150 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 ZNF788Q6ZQV5 615 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 LFNGQ8NES3 379 aa10.15□□□□□ -0.78
SYNE1-204ENST00000367248 LY6EQ16553 131 aa10.15□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF239Q16600 458 aaKnown RBP10.15□□□□□ -0.79
SYNE1-204ENST00000367248 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.79
SYNE1-204ENST00000367248 KLK13Q9UKR3 277 aa10.15□□□□□ -0.79
SYNE1-204ENST00000367248 TIMM9Q9Y5J7 89 aa10.15□□□□□ -0.79
SYNE1-204ENST00000367248 K7ESF4 209 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 SULT1A3P0DMM9 295 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 SULT1A4P0DMN0 295 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 SP6Q3SY56 376 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 KCNIP4Q6PIL6 250 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 ZNF574Q6ZN55 896 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-204ENST00000367248 LILRB4Q8NHJ6 448 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 HRASP01112 189 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 IGKV3-11P04433 115 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 IL5P05113 134 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 CT45A10P0DMU9 189 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 LIMK1P53667 647 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 KCNRGQ8N5I3 272 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 ZDHHC22Q8N966 263 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 POM121L2Q96KW2 1035 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 OR2D2Q9H210 308 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 BIN3Q9NQY0 253 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 NAT2P11245 290 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 IL11P20809 199 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 TAS2R45P59539 299 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 TMEM182Q6ZP80 229 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-204ENST00000367248 MAP6Q96JE9 813 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 C19orf12Q9NSK7 152 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 NAGKQ9UJ70 344 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 COX7A2P2O60397 106 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 AMMECR1Q9Y4X0 333 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-204ENST00000367248 GAMTQ14353 236 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 OR5AP2Q8NGF4 316 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 OR52B4Q8NGK2 314 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 GPX7Q96SL4 187 aaPredicted RBP10.14□□□□□ -0.79
SYNE1-204ENST00000367248 DSPPQ9NZW4 1301 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 KRBOX1C9JBD0 128 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 MGAT2Q10469 447 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 BAP18Q8IXM2 172 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 TVP23CQ96ET8 276 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 CHST5Q9GZS9 411 aa10.14□□□□□ -0.79
SYNE1-204ENST00000367248 ACACAQ13085 2346 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 CLEC18AA5D8T8 446 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 CLEC18CQ8NCF0 446 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 DYNLRB2Q8TF09 96 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 LHX4Q969G2 390 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 NIPSNAP3BQ9BS92 247 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 COL11A1P12107 1806 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 ZNFX1Q9P2E3 1918 aaKnown RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 CTSSP25774 331 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 LGALS7P47929 136 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 LIMS1P48059 325 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 OR5I1Q13606 314 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 GLDNQ6ZMI3 551 aaPredicted RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 PPP1R1CQ8WVI7 109 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 HGDQ93099 445 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 SLC25A22Q9H936 323 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 TDRD15B5MCY1 1934 aaKnown RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 SPTBP11277 2137 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 COX5AP20674 150 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 IRF3Q14653 427 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 IGFBP7Q16270 282 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 TPRX1Q8N7U7 411 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 OR5A2Q8NGI9 324 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 WNT2BQ93097 391 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 MED30Q96HR3 178 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 ATAD5Q96QE3 1844 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 ARPC4-TTLL3A0A0A6YYG9 625 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 ARG1P05089 322 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 GZMKP49863 264 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 HMGN3Q15651 99 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 PLAC9Q5JTB6 97 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 C15orf54Q8N8G6 183 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 MRPS18AQ9NVS2 196 aaKnown RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 AK3Q9UIJ7 227 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 OR5H1A6NKK0 313 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 RRASP10301 218 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 LPAR6P43657 344 aa10.13□□□□□ -0.79
SYNE1-204ENST00000367248 RPS4XP62701 263 aaKnown RBP10.13□□□□□ -0.79
SYNE1-204ENST00000367248 LCN15Q6UWW0 184 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms