RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 GPR50Q13585 617 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 CXorf66Q5JRM2 361 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 PLCXD3Q63HM9 321 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 THNSL2Q86YJ6 484 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR1N2Q8NGR9 330 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR6K6Q8NGW6 343 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR6N2Q8NGY6 317 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 DLX4Q92988 240 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 RHOVQ96L33 236 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 SH3GL1Q99961 368 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 ALX4Q9H161 411 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 GPR173Q9NS66 373 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 MTCH1Q9NZJ7 389 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 VPS13DQ5THJ4 4388 aa6.54□□□□□ -1.36
HMGB1P39-201ENST00000366304 PKHD1P08F94 4074 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 A6NIN4 97 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 PRR32B1ATL7 298 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 FGF16O43320 207 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 ATP6V1G1O75348 118 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 DEDDO75618 318 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 INMTO95050 263 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 IGLV3-1P01715 115 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 IGHV3-7P01780 117 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 H2BFMP0C1H6 154 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 TMEM11P17152 192 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 RHCEP18577 417 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 S100A1P23297 94 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 CNTFRP26992 372 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 DUSP1P28562 367 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR3A1P47881 315 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 POU3F4P49335 361 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 SLURP1P55000 103 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 RBM39Q14498 530 aaKnown RBP6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 GRK1Q15835 563 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 ZBTB49Q6ZSB9 765 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 CYP4Z1Q86W10 505 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 ERI1Q8IV48 349 aaKnown RBP6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 FOXRED2Q8IWF2 684 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 SLC15A3Q8IY34 581 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 ARPC1AQ92747 370 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 LEAP2Q969E1 77 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 SNX22Q96L94 193 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 HSPB9Q9BQS6 159 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 ADAM30Q9UKF2 790 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 UBE2J1Q9Y385 318 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 SIRT4Q9Y6E7 314 aaPredicted RBP6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 U3KQV3 271 aa6.53□□□□□ -1.36
HMGB1P39-201ENST00000366304 IGKV1-27A0A075B6S5 117 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 FAM183AA6NL82 134 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 AP4M1O00189 453 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 OVOL1O14753 267 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 SELENOFO60613 162 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 PFDN1O60925 122 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 NRASP01111 189 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGKV1D-33P01593 117 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGKV1-33P01594 117 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 APOC1P02654 83 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ELANEP08246 267 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR8U8P0C7N1 319 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 CALCBP10092 127 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 P2RX3P56373 397 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 LIPEQ05469 1076 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF616Q08AN1 781 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 HES1Q14469 280 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 TMEM42Q69YG0 159 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 HEPN1Q6WQI6 88 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ASRGL1Q7L266 308 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 RTN4RL2Q86UN3 420 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 SATL1Q86VE3 508 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 Q8N6K4 173 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 RNF148Q8N7C7 305 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF491Q8N8L2 437 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 Q8N9W7 124 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 TRMT10AQ8TBZ6 339 aaKnown RBP6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ZNF596Q8TC21 504 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 OR51E1Q8TCB6 317 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ST6GALNAC6Q969X2 333 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 INTS14Q96SY0 518 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 TEAD3Q99594 435 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 ABCG5Q9H222 651 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 NIPAL2Q9H841 368 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 GPR84Q9NQS5 396 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 PLSCR3Q9NRY6 295 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 FAM206AQ9NX38 181 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 PIGLQ9Y2B2 252 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 CDH10Q9Y6N8 788 aa6.52□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A087X0M5 115 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 IGHV3-72A0A0B4J1Y9 119 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 A0A1B0GX30 115 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 OOSP1A8MZH6 123 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 NME4O00746 187 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 BRI3O95415 125 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 CALB2P22676 271 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 GABRR1P24046 479 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 CEACAM3P40198 252 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 MNDAP41218 407 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 GLIPR1P48060 266 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 HCCSP53701 268 aa6.51□□□□□ -1.37
HMGB1P39-201ENST00000366304 RUNX1Q01196 453 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms