RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 SMR3AQ99954 134 aa-0.47□□□□□ -2.48
RNU4-40P-201ENST00000364351 PHLDA3Q9Y5J5 127 aa-0.47□□□□□ -2.48
RNU4-40P-201ENST00000364351 DSTQ03001 7570 aaKnown RBP-0.47□□□□□ -2.49
RNU4-40P-201ENST00000364351 IGSF23A1L1A6 192 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 GYG2O15488 501 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 RNF13O43567 381 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 PRH1P02810 166 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 HNMTP50135 292 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 HTR4Q13639 388 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 UBE2NLQ5JXB2 153 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 CENPPQ6IPU0 288 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 C2orf91Q6ZV80 131 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 NIT1Q86X76 327 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 OR2M3Q8NG83 312 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 OR10Z1Q8NGY1 313 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 LYARQ9NX58 379 aaKnown RBP-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 PRO2289Q9P1D8 64 aa-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 KLK5Q9Y337 293 aaPredicted RBP-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 SYNE1Q8NF91 8797 aaKnown RBP-0.48□□□□□ -2.49
RNU4-40P-201ENST00000364351 CXCL11O14625 94 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 BCKDKO14874 412 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 PTTG1O95997 202 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 HLA-HP01893 362 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 ACTR1AP61163 376 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 ZCWPW2Q504Y3 356 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 THOC7Q6I9Y2 204 aaKnown RBP-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 NANOGNBQ7Z5D8 188 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 VTCN1Q7Z7D3 282 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 FER1L6-AS1Q8NA97 138 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 ITFG1Q8TB96 612 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 FBXO32Q969P5 355 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 MRPS24Q96EL2 167 aaKnown RBP-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 VCX3AQ9NNX9 186 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 BTRCQ9Y297 605 aa-0.49□□□□□ -2.49
RNU4-40P-201ENST00000364351 KRT16P08779 473 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 GFAPP14136 432 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 MSR1P21757 451 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 RWDD2BP57060 319 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 FAM229BQ4G0N7 80 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 FAM228AQ86W67 206 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 CMBLQ96DG6 245 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 PKIBQ9C010 78 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 ZNF436Q9C0F3 470 aaPredicted RBP-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 KCNIP2Q9NS61 270 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 C14orf166Q9Y224 244 aaKnown RBP-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 USH1CQ9Y6N9 552 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 POLEQ07864 2286 aa-0.5□□□□□ -2.49
RNU4-40P-201ENST00000364351 TRBV6-5A0A0K0K1A5 114 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 A8MWP6 167 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 AGTP01019 485 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 CATP04040 527 aaKnown RBP-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 SOD3P08294 240 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 SCGB1C2P0DMR2 95 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 ARL2P36404 184 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 APOFQ13790 326 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 ATP6AP1LQ52LC2 224 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 LAIR2Q6ISS4 152 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 PPP1R42Q7Z4L9 355 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 CCNYL1Q8N7R7 359 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 SCGB1C1Q8TD33 95 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 TMED9Q9BVK6 235 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 PLEKHA1Q9HB21 404 aa-0.51□□□□□ -2.49
RNU4-40P-201ENST00000364351 KBTBD11-OT1A0A1B0GTJ5 212 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 XRCC2O43543 280 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 CACNG3O60359 315 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 IFNW1P05000 195 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 SPATA8Q6RVD6 105 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 ZFAND2AQ8N6M9 145 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 OR52E5Q8NH55 327 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 TCP10LQ8TDR4 215 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 TSGA13Q96PP4 275 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 GSDMAQ96QA5 445 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 ULBP1Q9BZM6 244 aa-0.52□□□□□ -2.49
RNU4-40P-201ENST00000364351 MPDU1O75352 247 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 OR2F2O95006 317 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 TACSTD2P09758 323 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 ACTR3P61158 418 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 ZNF117Q03924 483 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 GABRA6Q16445 453 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 Q6ZTI0 123 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 CCDC121Q6ZUS5 278 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 MARCH3Q86UD3 253 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 OR5T3Q8NGG3 340 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 METTL26Q96S19 204 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 PITX2Q99697 317 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 TAPBPLQ9BX59 468 aa-0.53□□□□□ -2.49
RNU4-40P-201ENST00000364351 DISP1Q96F81 1524 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 KDM5BQ9UGL1 1544 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 SOX14O95416 240 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 STOMP27105 288 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 HMOX2P30519 316 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 SPAM1P38567 509 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 RAP1GDS1P52306 607 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 CDNFQ49AH0 187 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 PRAMEF20Q5VT98 475 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 CPB2Q96IY4 423 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 GLT1D1Q96MS3 346 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 AP3M1Q9Y2T2 418 aa-0.54□□□□□ -2.5
RNU4-40P-201ENST00000364351 IGHV2OR16-5A0A0B4J2B6 119 aa-0.55□□□□□ -2.5
RNU4-40P-201ENST00000364351 CD300LBA8K4G0 201 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms