RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 K7EPK0 472 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 COX7A2P2O60397 106 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 CNMDO75829 334 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 MYO1DO94832 1006 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 FSTL3O95633 263 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 IGKV5-2P06315 115 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 GP1BAP07359 652 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 M6PRP20645 277 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 HLA-DMAP28067 261 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 SLC6A1P30531 599 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 TSPOP30536 169 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 MAGEA6P43360 314 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 ACOT2P49753 483 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 NUDT2P50583 147 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 AQP5P55064 265 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 CCL23P55773 120 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 ANGPT1Q15389 498 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 SYCP1Q15431 976 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 IGFBP7Q16270 282 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 ACTBL2Q562R1 376 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 UBE2NLQ5JXB2 153 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 FA2HQ7L5A8 372 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 GALNT10Q86SR1 603 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZFP62Q8NB50 900 aaPredicted RBP2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 ANGPTL6Q8NI99 470 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 PHF10Q8WUB8 498 aaKnown RBP2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 GTF2H4Q92759 462 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 YIPF5Q969M3 257 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 PPP1R36Q96LQ0 422 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 YPEL4Q96NS1 127 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 HBEGFQ99075 208 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 SUCNR1Q9BXA5 334 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 MFSD1Q9H3U5 465 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 POMKQ9H5K3 350 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 ZNF780BQ9Y6R6 833 aa2.03□□□□□ -2.08
RNU6-28P-201ENST00000362378 COL1A2P08123 1366 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 KIAA0232Q92628 1395 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 FABP7O15540 132 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 KCNK2O95069 426 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 CXorf1O96002 111 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 NRASP01111 189 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 HRASP01112 189 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 KRASP01116 189 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 SLC2A1P11166 492 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 PRTN3P24158 256 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 ELK4P28324 431 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR10A3P58181 314 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 RBX1P62877 108 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 PRKCDQ05655 676 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 SLAMF1Q13291 335 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 FLOT2Q14254 428 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM69Q5SWH9 247 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZFAND6Q6FIF0 208 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 LAMTOR1Q6IAA8 161 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 SELENOHQ8IZQ5 122 aaKnown RBP2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZNF738Q8NE65 137 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR6K3Q8NGY3 331 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 FAM45AQ8TCE6 357 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 SPACA1Q9HBV2 294 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 DHCR7Q9UBM7 475 aaKnown RBP2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 SCN4AP35499 1836 aa2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 EIF4G1Q04637 1599 aaKnown RBP2.02□□□□□ -2.09
RNU6-28P-201ENST00000362378 LOXHD1Q8IVV2 1947 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 BAZ2AQ9UIF9 1905 aaKnown RBP2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 ABCB11O95342 1321 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 A0A1B0GTI1 187 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 MKRN2OSH3BPM6 223 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 POLR3GO15318 223 aaPredicted RBP2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 SCN2BO60939 215 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 PDCD6O75340 191 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 CA2P00918 260 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 IGLV3-19P01714 112 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 PSMB9P28065 219 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 KRTAP10-8P60410 259 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 HBG1P69891 147 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 HBG2P69892 147 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 DMTNQ08495 405 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 OR10J3Q5JRS4 329 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 TMEM215Q68D42 235 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZNF773Q6PK81 442 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 FAM131AQ6UXB0 335 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 FAM183BPQ6ZVS7 135 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 SGPP2Q8IWX5 399 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 LYPD1Q8N2G4 141 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 ACTL9Q8TC94 416 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 SEC22CQ9BRL7 303 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 SLC25A31Q9H0C2 315 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 DSN1Q9H410 356 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 CHMP4BQ9H444 224 aaKnown RBP2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 INIPQ9NRY2 104 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 NRBP2Q9NSY0 501 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 MS4A12Q9NXJ0 267 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 CD300AQ9UGN4 299 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 ZNF706Q9Y5V0 76 aaPredicted RBP2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 TRIP11Q15643 1979 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 SVILO95425 2214 aa2.01□□□□□ -2.09
RNU6-28P-201ENST00000362378 TNKS1BP1Q9C0C2 1729 aaKnown RBP2□□□□□ -2.09
RNU6-28P-201ENST00000362378 COL4A4P53420 1690 aaPredicted RBP2□□□□□ -2.09
RNU6-28P-201ENST00000362378 TRAV8-3A0A0A6YYJ7 113 aa2□□□□□ -2.09
RNU6-28P-201ENST00000362378 A0A1W2PRG6 482 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms