RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZDHHC22Q8N966 263 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 SLC52A3Q9NQ40 469 aa16.32■□□□□ 0.2
CLIP2-202ENST00000361545 CDCP2Q5VXM1 449 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 TDRD6O60522 2096 aaKnown RBP16.31■□□□□ 0.2
CLIP2-202ENST00000361545 TRAV39A0A0B4J263 110 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 CYTIPO60759 359 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 KRTCAP3Q53RY4 240 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 SLC26A10Q8NG04 563 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 OR4A8P0C604 315 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 CD37P11049 281 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 AKR1C3P42330 323 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 CCL8P80075 99 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 ZNF90Q03938 601 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 FAM214BQ7L5A3 538 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 ANGPTL4Q9BY76 406 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 TSPAN2O60636 221 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 TNXAQ16473 311 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 RNF133Q8WVZ7 376 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 AKR1E2Q96JD6 320 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 TMED3Q9Y3Q3 217 aa16.31■□□□□ 0.2
CLIP2-202ENST00000361545 F2RL2O00254 374 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 CHEK1O14757 476 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 PRSS23O95084 383 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 COL19A1Q14993 1142 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 LURAP1Q96LR2 239 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 OGG1O15527 345 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 MAP6Q96JE9 813 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 RASL12Q9NYN1 266 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 OR5AC1P0C628 307 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 DHRS2Q13268 280 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 FOXJ2Q9P0K8 574 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 FGF2P09038 288 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 ADAM5Q6NVV9 412 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 C14orf79Q96F83 325 aa16.3■□□□□ 0.2
CLIP2-202ENST00000361545 C4orf51C9J302 202 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 RPL7L1Q6DKI1 246 aaKnown RBP16.29■□□□□ 0.2
CLIP2-202ENST00000361545 C8orf82Q6P1X6 216 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-202ENST00000361545 SMIM7Q9BQ49 75 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 UQCC1Q9NVA1 299 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 C20orf202A1L168 122 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 TMEM65Q6PI78 240 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 NIT2Q9NQR4 276 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 ZNF629Q9UEG4 869 aaPredicted RBP16.29■□□□□ 0.2
CLIP2-202ENST00000361545 SCN10AQ9Y5Y9 1956 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 CACNA1EQ15878 2313 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 OR4C45A6NMZ5 311 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 J3QT63 122 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 SFT2D2O95562 160 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 ZNF665Q9H7R5 613 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 NAA60Q9H7X0 242 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 SLC7A10Q9NS82 523 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 ZNF239Q16600 458 aaKnown RBP16.29■□□□□ 0.2
CLIP2-202ENST00000361545 CLEC12BQ2HXU8 276 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 SLC35D1Q9NTN3 355 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 CLN8Q9UBY8 286 aa16.29■□□□□ 0.2
CLIP2-202ENST00000361545 TIAF1O95411 115 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 BRS3P32247 399 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 HSD17B10Q99714 261 aaKnown RBP16.28■□□□□ 0.2
CLIP2-202ENST00000361545 B3GALNT1O75752 331 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 PCMT1P22061 227 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 ZNF528Q3MIS6 628 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 PIGYQ3MUY2 71 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 SEBOXQ9HB31 216 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-202ENST00000361545 PPP5D1E7EU14 171 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 GZMMP51124 257 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 C11orf87Q6NUJ2 197 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 MUC20Q8N307 709 aaPredicted RBP16.28■□□□□ 0.2
CLIP2-202ENST00000361545 WNK3Q9BYP7 1800 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 SCAND1P57086 179 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 MGAT2Q10469 447 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 ABHD1Q96SE0 405 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 ZMIZ1Q9ULJ6 1067 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 MYO16Q9Y6X6 1858 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 RAB19A4D1S5 217 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 OOEPA6NGQ2 149 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 PGA3P0DJD8 388 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 OR2B8PP59922 312 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 FAM181AQ8N9Y4 354 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 TGIF2Q9GZN2 237 aa16.28■□□□□ 0.2
CLIP2-202ENST00000361545 A0A1W2PN81 502 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 IGHA1P01876 353 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 NGFRP08138 427 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 CHRNA7P36544 502 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 PMELP40967 661 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 PRSS53Q2L4Q9 553 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 ADAMTS17Q8TE56 1095 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 TMEM147Q9BVK8 224 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 TET1Q8NFU7 2136 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 TRDCB7Z8K6 153 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 DUS4LO95620 317 aaKnown RBP16.27■□□□□ 0.2
CLIP2-202ENST00000361545 COX6A1P12074 109 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 SLC16A12Q6ZSM3 486 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 OR1A1Q9P1Q5 309 aa16.27■□□□□ 0.2
CLIP2-202ENST00000361545 SLC38A11Q08AI6 406 aa16.27■□□□□ 0.19
CLIP2-202ENST00000361545 BTNL8Q6UX41 500 aa16.27■□□□□ 0.19
CLIP2-202ENST00000361545 FAM122AQ96E09 287 aa16.27■□□□□ 0.19
CLIP2-202ENST00000361545 ANXA10Q9UJ72 324 aa16.27■□□□□ 0.19
CLIP2-202ENST00000361545 LOC101059948A0A1B0GTJ6 334 aa16.27■□□□□ 0.19
CLIP2-202ENST00000361545 PRR19A6NJB7 356 aa16.27■□□□□ 0.19
CLIP2-202ENST00000361545 RFPL4AA6NLU0 287 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms