RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SARGQ9BW04 601 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 NOSIPQ9Y314 301 aaKnown RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 CHD5Q8TDI0 1954 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 FGF16O43320 207 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 SYT13Q7L8C5 426 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 CMTM2Q8TAZ6 248 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 HDHD3Q9BSH5 251 aaPredicted RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 RIMS4Q9H426 269 aaPredicted RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 SLC35D1Q9NTN3 355 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 LYRM2Q9NU23 88 aaPredicted RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 SIP14410 1827 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 OTOL1A6NHN0 477 aaPredicted RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 UBE2CO00762 179 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 TRGC1P0CF51 173 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 MMP9P14780 707 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 PMCHP20382 165 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 SLC38A11Q08AI6 406 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 OR5I1Q13606 314 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 TIGITQ495A1 244 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 HLA-CQ95604 372 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 MSI2Q96DH6 328 aaKnown RBP14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 CACNG5Q9UF02 275 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 TBX21Q9UL17 535 aa14.08□□□□□ -0.16
CLSTN1-201ENST00000361311 SBF1O95248 1867 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 SLC25A6P12236 298 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 ZNF708P17019 499 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 DTYMKP23919 212 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 ZNF343Q6P1L6 599 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 TGIF2LXQ8IUE1 241 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 LURAP1LQ8IV03 231 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 POC1AQ8NBT0 407 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 OR4A4PQ8NGN8 299 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 OR2I1PQ8NGU4 316 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 RTTNQ86VV8 2226 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 E9PQ18 207 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 EDN3P14138 238 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 SLC35E3Q7Z769 313 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 TBC1D26Q86UD7 250 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 ADPRHL1Q8NDY3 354 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 DAZAP1Q96EP5 407 aaKnown RBP14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 FAM234AQ9H0X4 552 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 RND3P61587 244 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 LRP11Q86VZ4 500 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 NEIL1Q96FI4 390 aaPredicted RBP14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 TECTBQ96PL2 329 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 OR6C1Q96RD1 312 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 SPSB2Q99619 263 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 OBP2BQ9NPH6 170 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 HSPB1P04792 205 aaKnown RBP14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 SSR4P51571 173 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 MRGPRGQ86SM5 289 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 MTCH1Q9NZJ7 389 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 MYOTQ9UBF9 498 aa14.07□□□□□ -0.16
CLSTN1-201ENST00000361311 CYB5R3P00387 301 aaPredicted RBP14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 B4GALT1P15291 398 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 HOXA5P20719 270 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 OR10J1P30954 320 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 CEBPEQ15744 281 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 FFAR4Q5NUL3 377 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 FDX2Q6P4F2 183 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 C16orf47Q6ZP98 133 aaPredicted RBP14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 TDHQ8IZJ6 230 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 GFI1Q99684 422 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 MSL2Q9HCI7 577 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 H0Y8G0 127 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 THBS3P49746 956 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 CLDN15P56746 228 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 MESP2Q0VG99 397 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 LTBP1Q14766 1721 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 DOCK4Q8N1I0 1966 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 CIB3Q96Q77 187 aaPredicted RBP14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 DDA1Q9BW61 102 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 A0A087WV48 116 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 C5orf52A6NGY3 159 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 COLCA2A8K830 154 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 NRG2O14511 850 aaPredicted RBP14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 PPYP01298 95 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 PRSS12P56730 875 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 RPS16P62249 146 aaKnown RBP14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 C8orf44Q96CB5 159 aa14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 ERRFI1Q9UJM3 462 aaPredicted RBP14.06□□□□□ -0.16
CLSTN1-201ENST00000361311 WDR81Q562E7 1941 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 SH3BGRL3Q9H299 93 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 TMEM252Q8N6L7 170 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 TUBA4BQ9H853 241 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 TMEM9BQ9NQ34 198 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 ST8SIA5O15466 376 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 GCGP01275 180 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 ZNF17P17021 662 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 FHL5Q5TD97 284 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 PRAMEF5Q5TYX0 476 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 TMEM164Q5U3C3 297 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 PRAMEF6Q5VXH4 476 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 PAM16Q9Y3D7 125 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 PLXNB2O15031 1838 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 XIRP1Q702N8 1843 aaKnown RBP14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 IGLV1-36A0A0B4J1U3 117 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 SOX15O60248 233 aa14.05□□□□□ -0.16
CLSTN1-201ENST00000361311 HSBP1O75506 76 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms