RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MRPL41Q8IXM3 137 aaKnown RBP16.78■□□□□ 0.28
CD47-202ENST00000361309 OSR2Q8N2R0 312 aa16.78■□□□□ 0.28
CD47-202ENST00000361309 ZNF649Q9BS31 505 aa16.78■□□□□ 0.28
CD47-202ENST00000361309 ADI1Q9BV57 179 aa16.78■□□□□ 0.28
CD47-202ENST00000361309 PRRG3Q9BZD7 231 aa16.78■□□□□ 0.28
CD47-202ENST00000361309 GPR61Q9BZJ8 451 aa16.78■□□□□ 0.28
CD47-202ENST00000361309 GLS2Q9UI32 602 aa16.78■□□□□ 0.28
CD47-202ENST00000361309 TRGV10A0A0A0MS01 117 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 SIRPB1O00241 398 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 FKBP6O75344 327 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 GDNFP39905 211 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 EFNB1P98172 346 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 FAHD1Q6P587 224 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 SPATA24Q86W54 205 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 TMEM163Q8TC26 289 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 ZNF286AQ9HBT8 521 aa16.77■□□□□ 0.28
CD47-202ENST00000361309 PSMB11A5LHX3 300 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 CYB5AP00167 134 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 CEACAM3P40198 252 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 RBP2P50120 134 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 ATP1B3P54709 279 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 SPIN3Q5JUX0 258 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 TPTE2P1Q5T6R2 138 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 CCDC54Q8NEL0 328 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 OR51D1Q8NGF3 324 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 CORO2AQ92828 525 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 NRBF2Q96F24 287 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 IL4I1Q96RQ9 567 aa16.76■□□□□ 0.27
CD47-202ENST00000361309 A0A1W2PQL4 384 aaPredicted RBP16.75■□□□□ 0.27
CD47-202ENST00000361309 METTL15A6NJ78 407 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 BUB1B-PAK6H3BSN5 160 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 M0QZK8 103 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 TOR1AO14656 332 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 ATP8B1O43520 1251 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 CCDC159P0C7I6 412 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 CD34P28906 385 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 EPHA2P29317 976 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 GLIPR1P48060 266 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 THBS3P49746 956 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 CDC42P60953 191 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 AESQ08117 197 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 KPNB1Q14974 876 aaKnown RBP16.75■□□□□ 0.27
CD47-202ENST00000361309 HLA-DRB5Q30154 266 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 ZNF329Q86UD4 541 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 GID4Q8IVV7 300 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 DNAAF1Q8NEP3 725 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 TAS2R3Q9NYW6 316 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 GSTK1Q9Y2Q3 226 aa16.75■□□□□ 0.27
CD47-202ENST00000361309 IGKV1-9A0A0C4DH69 117 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 LY6LH3BQJ8 138 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 SH2D1BO14796 132 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 MITFO75030 526 aaPredicted RBP16.74■□□□□ 0.27
CD47-202ENST00000361309 OR2H2O95918 312 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 MTCP1P56278 107 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 RPL23AP62750 156 aaKnown RBP16.74■□□□□ 0.27
CD47-202ENST00000361309 C12orf73Q69YU5 71 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 RDH10Q8IZV5 341 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 PRSS35Q8N3Z0 413 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 PP6455Q8WZ26 134 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 CREB3L1Q96BA8 519 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 C10orf35Q96D05 121 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 HMG20AQ9NP66 347 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 EXOSC4Q9NPD3 245 aaKnown RBP16.74■□□□□ 0.27
CD47-202ENST00000361309 PCDHGB5Q9Y5G0 923 aa16.74■□□□□ 0.27
CD47-202ENST00000361309 LOC107986453A0A1B0GWG9 222 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 FUOMA2VDF0 154 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 ZAR1LA6NP61 321 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 APOL3O95236 402 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 FAM107AO95990 144 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 OR2T7P0C7T2 308 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 MNDAP41218 407 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 OR3A4PP47883 348 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 PRRX1P54821 245 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 FLOT2Q14254 428 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 RBM39Q14498 530 aaKnown RBP16.73■□□□□ 0.27
CD47-202ENST00000361309 UTF1Q5T230 341 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 CCDC144NLQ6NUI1 221 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 C18orf65Q6ZTR6 163 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 OR4D6Q8NGJ1 314 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 ADAT3Q96EY9 351 aaPredicted RBP16.73■□□□□ 0.27
CD47-202ENST00000361309 MCRIP2Q9BUT9 160 aaKnown RBP16.73■□□□□ 0.27
CD47-202ENST00000361309 KRT84Q9NSB2 600 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 MOB4Q9Y3A3 225 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 HSPE1-MOB4S4R3N1 261 aa16.73■□□□□ 0.27
CD47-202ENST00000361309 TCRBV3S1A0A5B6 114 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 SULT1C4O75897 302 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 PTGFRP43088 359 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 KIR3DL2P43630 455 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 PDZK1IP1Q13113 114 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 C8orf86Q6ZUL3 223 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 RNF144BQ7Z419 303 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 OR10H4Q8NGA5 316 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 RFT1Q96AA3 541 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 ING3Q9NXR8 418 aa16.72■□□□□ 0.27
CD47-202ENST00000361309 WARS2Q9UGM6 360 aaKnown RBP16.72■□□□□ 0.27
CD47-202ENST00000361309 IGKV1-12A0A0C4DH73 117 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 ODAMA1E959 279 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 OOSP1A8MZH6 123 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 IGKV1D-12P01611 117 aa16.71■□□□□ 0.27
CD47-202ENST00000361309 UBCP0CG48 685 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms