RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 F8VWA3 439 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 NDUFA2O43678 99 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 SFT2D2O95562 160 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 SERPINA5P05154 406 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 CASP6P55212 293 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 MRPL49Q13405 166 aaKnown RBP11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 CXorf67Q86X51 503 aaPredicted RBP11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 C17orf78Q8N4C9 275 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 OR14K1Q8NGZ2 314 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 APOBEC3DQ96AK3 386 aaPredicted RBP11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 BOD1Q96IK1 185 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 LYZL4Q96KX0 146 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 V9GYS6 101 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 DHRS7CA6NNS2 312 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 NUPL2O15504 423 aaKnown RBP11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 SOCS1O15524 211 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 CRTAPO75718 401 aaPredicted RBP11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 PGAM2P15259 253 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 FPR2P25090 351 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 MALLQ13021 153 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 TBC1D28Q2M2D7 210 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 UNQ6126/PRO20091Q6UXV3 157 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 BAP18Q8IXM2 172 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 SLC30A7Q8NEW0 376 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 SEMA6DQ8NFY4 1073 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 OR2AE1Q8NHA4 323 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 RNF141Q8WVD5 230 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 POM121L2Q96KW2 1035 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 NKX6-2Q9C056 277 aaPredicted RBP11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 OBP2BQ9NPH6 170 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 IGSF10Q6WRI0 2623 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 DNASE2O00115 360 aaPredicted RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 FGF16O43320 207 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 CCL2P13500 99 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 AMY2BP19961 511 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 THBS4P35443 961 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 OR3A4PP47883 348 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 TAS2R46P59540 309 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 PLAC9Q5JTB6 97 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 Q6ZSR3 168 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 BHLHA15Q7RTS1 189 aaPredicted RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 TMEM104Q8NE00 496 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 PP6455Q8WZ26 134 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 C1orf147Q96MC9 270 aaPredicted RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 SPACA5Q96QH8 159 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 BANF2Q9H503 90 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 FN3KRPQ9HA64 309 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 PCDHB16Q9NRJ7 776 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 PCDHB10Q9UN67 800 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 PIGLQ9Y2B2 252 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 A0A0A6YYD4 124 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 MSTNO14793 375 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 PET100P0DJ07 73 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 NPY4RP50391 375 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 TMEM50BP56557 158 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 EIF5AP63241 154 aaKnown RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 ZNF474Q6S9Z5 364 aaPredicted RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 ATRAIDQ6UW56 229 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 MYPOPQ86VE0 399 aaPredicted RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 CLRN3Q8NCR9 226 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 OR1S2Q8NGQ3 325 aa11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 ZNF629Q9UEG4 869 aaPredicted RBP11.32□□□□□ -0.6
SQSTM1-201ENST00000360718 A0A0G2JNJ9 132 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 TMEM218A2RU14 115 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 MFNGO00587 321 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 ATG12O94817 140 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 BMP5P22003 454 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 IDH3GP51553 393 aaPredicted RBP11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 TMEM211Q6ICI0 200 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 PRSS54Q6PEW0 395 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 CLEC18BQ6UXF7 455 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 PEG10Q86TG7 708 aaKnown RBP11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 SVBPQ8N300 66 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 FAM89BQ8N5H3 189 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 OR51T1Q8NGJ9 327 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 OR5L1Q8NGL2 311 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 ARL11Q969Q4 196 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 ARHGAP5-AS1Q96IT6 56 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 S100A13Q99584 98 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 RNF126Q9BV68 326 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 C5orf66Q9H5L9 145 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 METTL8Q9H825 291 aaKnown RBP11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 CDH20Q9HBT6 801 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 Q9UFV3 132 aa11.31□□□□□ -0.6
SQSTM1-201ENST00000360718 ABCD4O14678 606 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 LYL1P12980 280 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 PRF1P14222 555 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 CBR1P16152 277 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 FAHP16930 419 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 ZNF14P17017 642 aaPredicted RBP11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 PRSS12P56730 875 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 PPA1Q15181 289 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 TSNAXQ99598 290 aaKnown RBP11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 TMEM100Q9NV29 134 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 AMDHD2Q9Y303 409 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 MEMO1Q9Y316 297 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 PLATP00750 562 aa11.3□□□□□ -0.6
SQSTM1-201ENST00000360718 CELA3BP08861 270 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms