RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CCR2P41597 374 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 DYNLT3P51808 116 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 IL11RAQ14626 422 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 ARL17AQ8IVW1 177 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 ICAM5Q9UMF0 924 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 CRYBG1Q9Y4K1 1723 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 IGKV6-21A0A0C4DH24 114 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 G3V3Y1 287 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 PLPP1O14494 284 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 IGHV3-9P01782 118 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 TCL1AP56279 114 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 SCAND1P57086 179 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 TRA2AQ13595 282 aaKnown RBP eCLIP11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC46A2Q9BY10 475 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 HCFC1R1Q9NWW0 138 aa11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 C19orf53Q9UNZ5 99 aaPredicted RBP11.82□□□□□ -0.52
SRGAP3-201ENST00000360413 MFSD2BA6NFX1 497 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 RPS4Y1P22090 263 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 TMEM33P57088 247 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 PRSS54Q6PEW0 395 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 OR2I1PQ8NGU4 316 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 EID2BQ96D98 161 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 SH3BGRL3Q9H299 93 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 IGHV3-64DA0A0J9YX35 117 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 C11orf94C9JXX5 98 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 DPTQ07507 201 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 TAS1R1Q7RTX1 841 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 RAB33BQ9H082 229 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 CACNA1GO43497 2377 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 PDCD11Q14690 1871 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 OR1D5P58170 312 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 C12orf54Q6X4T0 127 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 PIPOXQ9P0Z9 390 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 DOCK5Q9H7D0 1870 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 UBE2L6O14933 153 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 IL13RA2Q14627 380 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 TMEM52BQ4KMG9 183 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF740Q8NDX6 193 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 MISP3Q96FF7 219 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 H3BQ15 152 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC17A2O00624 439 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 SFT2D2O95562 160 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 IGF2P01344 180 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 BTG2P78543 158 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 RRN3P1Q2M238 152 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 MARCH5Q9NX47 278 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 HCFC2Q9Y5Z7 792 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 SERTM1A2A2V5 107 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 FRG2CA6NGY1 282 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 PPIHO43447 177 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 SMAD4Q13485 552 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 FUT3P21217 361 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF121P58317 390 aaPredicted RBP11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 OIT3Q8WWZ8 545 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 TMPRSS13Q9BYE2 586 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 BTAF1O14981 1849 aa11.81□□□□□ -0.52
SRGAP3-201ENST00000360413 PCNX1Q96RV3 2341 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 TMPRSS11DO60235 418 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 RNF224P0DH78 156 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 RPL18Q07020 188 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 GAMTQ14353 236 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 OR2C3Q8N628 320 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 PDXPQ96GD0 296 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 TMEM204Q9BSN7 226 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 PTGESO14684 152 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 LGALSLQ3ZCW2 172 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 MORN1Q5T089 497 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 MOGAT1Q96PD6 335 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 DDA1Q9BW61 102 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 PPIL1Q9Y3C6 166 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 TMEM272A0A1B0GTI8 110 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 OR4S2Q8NH73 311 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 ZNF195O14628 629 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 GABRA1P14867 456 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 MPV17LQ2QL34 196 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 NKAIN2Q5VXU1 208 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 CCDC144NLQ6NUI1 221 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 SYT8Q8NBV8 401 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 MRGPRX3Q96LB0 322 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 SDF2Q99470 211 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 IER3P46695 156 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 CACNA1EQ15878 2313 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 SLC25A30Q5SVS4 291 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 LAMB2P55268 1798 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 FAM74A7A6NL05 159 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 BTF3P20290 206 aaKnown RBP11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 JMJD6Q6NYC1 403 aaPredicted RBP11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 IL20Q9NYY1 176 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 MTFP1Q9UDX5 166 aa11.8□□□□□ -0.52
SRGAP3-201ENST00000360413 SNURFLB1AK76 121 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 NPIPB6E9PJ23 425 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 CXCL3P19876 107 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 FUT7Q11130 342 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 RASL11BQ9BPW5 248 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 NAA60Q9H7X0 242 aa11.79□□□□□ -0.52
SRGAP3-201ENST00000360413 H7C2G1 150 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms