RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CHST4Q8NCG5 386 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 OR5M8Q8NGP6 311 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 PPP1R1CQ8WVI7 109 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 BBC3Q96PG8 261 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 C1QTNF5Q9BXJ0 243 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 TMEM59Q9BXS4 323 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 CST11Q9H112 138 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 BARX1Q9HBU1 254 aaPredicted RBP11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 ARHGAP21Q5T5U3 1957 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 POLEQ07864 2286 aa11.96□□□□□ -0.49
CSNK1E-201ENST00000359867 A0A1W2PPE3 182 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 WIPF3A6NGB9 483 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 CD74P04233 296 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 C1orf185Q5T7R7 199 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 KCTD9Q7L273 389 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 SSX9Q7RTT3 188 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 DPPA2Q7Z7J5 298 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 CNEP1R1Q8N9A8 125 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 OR56B1Q8NGI3 324 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 COMMD9Q9P000 198 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 PCNX1Q96RV3 2341 aa11.96□□□□□ -0.5
CSNK1E-201ENST00000359867 RNF222A6NCQ9 220 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 EEF1E1-BLOC1S5C9J1V9 151 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 SNAPC5O75971 98 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 MPIG6BO95866 241 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 GSTP1P09211 210 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 ARR3P36575 388 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 PPP1R1AQ13522 171 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 CNN3Q15417 329 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 DHRS7BQ6IAN0 325 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 C11orf87Q6NUJ2 197 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 COLCA1Q6ZS62 124 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 ZNF584Q8IVC4 421 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 NAXEQ8NCW5 288 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 OR1S2Q8NGQ3 325 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 SPSB4Q96A44 273 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 GMPPAQ96IJ6 420 aaPredicted RBP11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 CYYR1Q96J86 154 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 GLRX2Q9NS18 164 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 TNFSF18Q9UNG2 199 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 UBE2CO00762 179 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 ACKR3P25106 362 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 EIF2S3LQ2VIR3 472 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM42Q69YG0 159 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 FJX1Q86VR8 437 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 FAM219AQ8IW50 185 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 FAM89BQ8N5H3 189 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 KCNRGQ8N5I3 272 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 TMEM104Q8NE00 496 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 CPEB3Q8NE35 698 aaKnown RBP11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 OR2AE1Q8NHA4 323 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 THAP6Q8TBB0 222 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 NUDCD2Q8WVJ2 157 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 SELENOIQ9C0D9 397 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 ZNF835Q9Y2P0 537 aa11.95□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A0D9SG52 128 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 hCG_38984A0A1B0GV85 526 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 ATXN7O15265 892 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 BCL2L11O43521 198 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 PRB1P04280 392 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 VAMP1P23763 118 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 AKIRIN2Q53H80 203 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 VWA1Q6PCB0 445 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 C14orf144Q96I85 54 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MEGF10Q96KG7 1140 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 S100A13Q99584 98 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 ALX4Q9H161 411 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MBD3L4A6NDZ8 208 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MBD3L3A6NE82 208 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MBD3L5A6NJ08 208 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 F5H0A9 414 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 SS18L1O75177 396 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 CRTAPO75718 401 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 AKR1C4P17516 323 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 NFYBP25208 207 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 FAM3AP98173 230 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MRPL49Q13405 166 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MEF2DQ14814 521 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 OR8B8Q15620 311 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 PNLIPRP3Q17RR3 467 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 C9orf135Q5VTT2 229 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MOB3CQ70IA8 216 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 FAM214BQ7L5A3 538 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 TRAPPC6BQ86SZ2 158 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 ADAD2Q8NCV1 583 aaKnown RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 MBD3L2Q8NHZ7 208 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 TECTBQ96PL2 329 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 SLC25A21Q9BQT8 299 aaPredicted RBP11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 PRSS50Q9UI38 385 aa11.94□□□□□ -0.5
CSNK1E-201ENST00000359867 A0A0A6YYD4 124 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 CD8AP01732 235 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 KIR2DL2P43627 348 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 NPBWR1P48145 328 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 PCP4P48539 62 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 FOXG1P55316 489 aaPredicted RBP11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 RBPJQ06330 500 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 FABP9Q0Z7S8 132 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 PDZK1IP1Q13113 114 aa11.93□□□□□ -0.5
CSNK1E-201ENST00000359867 FBXW9Q5XUX1 488 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms