RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RPL30P62888 115 aaKnown RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 SRSF5Q13243 272 aaKnown RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 SEZ6L2Q6UXD5 910 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 RNF165Q6ZSG1 346 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 C17orf47Q8NEP4 570 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 GP1BAP07359 652 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 POLR2GP62487 172 aaKnown RBP eCLIP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 HES3Q5TGS1 186 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 SRD5A3Q9H8P0 318 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 LYRM2Q9NU23 88 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 F2RL2O00254 374 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 MVDP53602 400 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 TUSC5Q8IXB3 177 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 ZNF707Q96C28 371 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 SLIRPQ9GZT3 109 aaKnown RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 HPXP02790 462 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 SSX1Q16384 188 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 RASL11BQ9BPW5 248 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 C19orf43Q9BQ61 176 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 CD3EP07766 207 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 TRIP6Q15654 476 aaKnown RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 B3GNTL1Q67FW5 361 aaPredicted RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 PWWP2BQ6NUJ5 590 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 TMEM92Q6UXU6 159 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 TIPARPQ7Z3E1 657 aaKnown RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 ZG16BQ96DA0 208 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 PIK3IP1Q96FE7 263 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 OR6C3Q9NZP0 311 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 RPS4Y1P22090 263 aaKnown RBP16.26■□□□□ 0.19
SHANK1-202ENST00000359082 PRR7Q8TB68 274 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 OR10C1Q96KK4 312 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 MOGAT1Q96PD6 335 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 STARD10Q9Y365 291 aa16.26■□□□□ 0.19
SHANK1-202ENST00000359082 FOXO1Q12778 655 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 XAF1Q6GPH4 301 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 OR5R1Q8NH85 324 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 PRR35P0CG20 571 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 EIF3IQ13347 325 aaKnown RBP16.25■□□□□ 0.19
SHANK1-202ENST00000359082 WDR73Q6P4I2 378 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 DOLPP1Q86YN1 238 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 OR4D9Q8NGE8 314 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 TRDCB7Z8K6 153 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 RHBDL1O75783 438 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 PRSS54Q6PEW0 395 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 SPICQ8N5J4 248 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 OR4S2Q8NH73 311 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 GPR27Q9NS67 375 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 AMDHD2Q9Y303 409 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 OOEPA6NGQ2 149 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 HAND1O96004 215 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 NAT1P18440 290 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 ATP5SQ99766 215 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 RGS13O14921 159 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 CTLA4P16410 223 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 SULT1A1P50225 295 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 NUFIP2Q7Z417 695 aaKnown RBP16.25■□□□□ 0.19
SHANK1-202ENST00000359082 OR10A7Q8NGE5 316 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 ASCL3Q9NQ33 180 aa16.25■□□□□ 0.19
SHANK1-202ENST00000359082 RBFOX3A6NFN3 312 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 SRD5A2P31213 254 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 RPL29P47914 159 aaKnown RBP16.24■□□□□ 0.19
SHANK1-202ENST00000359082 MRPS11P82912 194 aaKnown RBP16.24■□□□□ 0.19
SHANK1-202ENST00000359082 MOGAT3Q86VF5 341 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 WFDC3Q8IUB2 231 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 C1orf210Q8IVY1 113 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 PAPPA2Q9BXP8 1791 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 ORM1P02763 201 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 PCDHGA9Q9Y5G4 932 aaKnown RBP16.24■□□□□ 0.19
SHANK1-202ENST00000359082 LIPGQ9Y5X9 500 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 IGHV3OR15-7A0A075B7D8 119 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 TRAV38-1A0A0B4J264 116 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 ANKRD20A5PA0PJZ0 165 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 H3BVH4 76 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 CD1BP29016 333 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 SELENOPP49908 381 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 PSG5Q15238 335 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 OR4P4Q8NGL7 312 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 MANBALQ9NQG1 85 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 CROCCQ5TZA2 2017 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 IGHV1OR15-9A0A0B4J2B8 117 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 GSTZ1O43708 216 aaPredicted RBP16.24■□□□□ 0.19
SHANK1-202ENST00000359082 HLA-DRB3P79483 266 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 ATP6V1FQ16864 119 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 LHX8Q68G74 356 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 GPBAR1Q8TDU6 330 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 RAB1CQ92928 201 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 MRPL37Q9BZE1 423 aaKnown RBP16.24■□□□□ 0.19
SHANK1-202ENST00000359082 NAT8Q9UHE5 227 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 SEC11CQ9BY50 192 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 LPAR3Q9UBY5 353 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 GON4LQ3T8J9 2241 aa16.24■□□□□ 0.19
SHANK1-202ENST00000359082 MAGEA5P43359 124 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 TMEM33P57088 247 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 Q6ZN92 141 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 SCMH1Q96GD3 660 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 JMJD6Q6NYC1 403 aaPredicted RBP16.23■□□□□ 0.19
SHANK1-202ENST00000359082 THSD4Q6ZMP0 1018 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 DUXBA0A1W2PPF3 345 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 PEX11BO96011 259 aa16.23■□□□□ 0.19
SHANK1-202ENST00000359082 FGF9P31371 208 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms