RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 ABRACLQ9P1F3 81 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 CTSZQ9UBR2 303 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 FBLN5Q9UBX5 448 aa12.71□□□□□ -0.38
TPM1-206ENST00000358278 TLN2Q9Y4G6 2542 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 A0A096LNT2 108 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 A0A1B0GW55 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 TNFRSF13BO14836 293 aaPredicted RBP12.7□□□□□ -0.38
TPM1-206ENST00000358278 DEGS1O15121 323 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L2P0CJ85 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L3P0CJ86 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L4P0CJ87 422 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L5P0CJ88 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L6P0CJ89 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L7P0CJ90 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 SELLP14151 372 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 AMY2BP19961 511 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 CPT2P23786 658 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 IL2RGP31785 369 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 PITPNBP48739 271 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 LOXL1Q08397 574 aaPredicted RBP12.7□□□□□ -0.38
TPM1-206ENST00000358278 MPV17LQ2QL34 196 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 ESCO2Q56NI9 601 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 LRRC10Q5BKY1 277 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4L9Q6RFH8 374 aaPredicted RBP12.7□□□□□ -0.38
TPM1-206ENST00000358278 CHST4Q8NCG5 386 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 ZNRF1Q8ND25 227 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 DYNC2LI1Q8TCX1 351 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 AP3S1Q92572 193 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
TPM1-206ENST00000358278 DGCR14Q96DF8 476 aaKnown RBP12.7□□□□□ -0.38
TPM1-206ENST00000358278 DUX4Q9UBX2 424 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 CLN8Q9UBY8 286 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 METRNQ9UJH8 293 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 RAB22AQ9UL26 194 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 ETV7Q9Y603 341 aa12.7□□□□□ -0.38
TPM1-206ENST00000358278 F5H0A9 414 aaPredicted RBP12.69□□□□□ -0.38
TPM1-206ENST00000358278 H7C1Q1 480 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 LDLRAD4O15165 306 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 NDUFB3O43676 98 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 WNT2P09544 360 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 ZNF182P17025 639 aaPredicted RBP12.69□□□□□ -0.38
TPM1-206ENST00000358278 RAB6AP20340 208 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 LMO4P61968 165 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 GNB2P62879 340 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 ATAD3CQ5T2N8 411 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 METAP1DQ6UB28 335 aaPredicted RBP12.69□□□□□ -0.38
TPM1-206ENST00000358278 DCUN1D5Q9BTE7 237 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 SSBP3Q9BWW4 388 aaPredicted RBP12.69□□□□□ -0.38
TPM1-206ENST00000358278 BATF3Q9NR55 127 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 CCDC59Q9P031 241 aaKnown RBP12.69□□□□□ -0.38
TPM1-206ENST00000358278 SLC25A10Q9UBX3 287 aaPredicted RBP12.69□□□□□ -0.38
TPM1-206ENST00000358278 MAB21L2Q9Y586 359 aa12.69□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A10PA6NDY2 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A18PA6NE21 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A16PA6NEW6 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A20PA6NIJ5 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A8PA6NJQ4 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A7PA6NKC0 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A22PA8MWA6 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A12PA8MX19 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A5PA8MXJ8 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A23PA8MXZ1 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 HSPB6O14558 160 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 DVL1O14640 695 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A15PP0C7V4 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A13PP0C7W8 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A14PP0C7W9 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM90A24PP0C7X0 464 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 SEC61A1P61619 476 aaKnown RBP12.68□□□□□ -0.38
TPM1-206ENST00000358278 PLA2G7Q13093 441 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FAM189A2Q15884 450 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 FOXB2Q5VYV0 432 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 Q6P435 159 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 OR5H6Q8NGV6 325 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 ACOT12Q8WYK0 555 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 ST8SIA4Q92187 359 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 PTX4Q96A99 478 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 NICN1Q9BSH3 213 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 TM2D1Q9BX74 207 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 CHST6Q9GZX3 395 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 LPAR5Q9H1C0 372 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
TPM1-206ENST00000358278 SPATA2Q9UM82 520 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 METTL21EPA6NDL7 271 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 SLC33A1O00400 549 aaPredicted RBP12.68□□□□□ -0.38
TPM1-206ENST00000358278 SMAD7O15105 426 aaKnown RBP12.68□□□□□ -0.38
TPM1-206ENST00000358278 NDUFB7P17568 137 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 VEGFCP49767 419 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 NPY4RP50391 375 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 EFNB2P52799 333 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 PAN3Q58A45 887 aaKnown RBP12.68□□□□□ -0.38
TPM1-206ENST00000358278 MZT2AQ6P582 158 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 PPP1R35Q8TAP8 253 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 NEK7Q8TDX7 302 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 PPA2Q9H2U2 334 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 IFT22Q9H7X7 185 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 SPACA1Q9HBV2 294 aa12.68□□□□□ -0.38
TPM1-206ENST00000358278 RHBDL2Q9NX52 303 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms