RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 OR13F1Q8NGS4 319 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 ITPKCQ96DU7 683 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 ZNF251Q9BRH9 671 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 OR2S2Q9NQN1 319 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TAS2R3Q9NYW6 316 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 SESN1Q9Y6P5 492 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TTC28Q96AY4 2481 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TMEM272A0A1B0GTI8 110 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 WIPF3A6NGB9 483 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 DVL1O14640 695 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TUSC2O75896 110 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 SNAPC5O75971 98 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 MSMBP08118 114 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 PGA5P0DJD9 388 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 PVALBP20472 110 aaPredicted RBP7.78□□□□□ -1.16
UPF2-202ENST00000357604 VMA21Q3ZAQ7 101 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TMEM186Q96B77 213 aa7.78□□□□□ -1.16
UPF2-202ENST00000357604 TSNAXQ99598 290 aaKnown RBP7.78□□□□□ -1.16
UPF2-202ENST00000357604 EP300Q09472 2414 aaPredicted RBP7.77□□□□□ -1.16
UPF2-202ENST00000357604 TNRC18O15417 2968 aaPredicted RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 SNRPBP14678 240 aaKnown RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 P2RX3P56373 397 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 ZNF826PQ6ZT77 177 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 C22orf15Q8WYQ4 148 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 CLEC7AQ9BXN2 247 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 GON7Q9BXV9 100 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 ZNF205O95201 554 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 OTX1P32242 354 aaPredicted RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 RFLNBQ8N5W9 214 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 FAM216AQ8WUB2 273 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 RRNAD1Q96FB5 475 aaKnown RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 CCDC32Q9BV29 185 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 POFUT1Q9H488 388 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 METTL8Q9H825 291 aaKnown RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 PTTG2Q9NZH5 202 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 PAIP2BQ9ULR5 123 aaKnown RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 TRDCB7Z8K6 153 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 HPXP02790 462 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 SERPINE2P07093 398 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 ETV6P41212 452 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 BAMBIQ13145 260 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 SWI5Q1ZZU3 235 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 KRTAP27-1Q3LI81 207 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 WDR82Q6UXN9 313 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 COLCA1Q6ZS62 124 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 GDPD1Q8N9F7 314 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 YIPF6Q96EC8 236 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 PECRQ9BY49 303 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 PIPOXQ9P0Z9 390 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 KPTNQ9Y664 436 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 TNRC6AQ8NDV7 1962 aaKnown RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 LINC00854A0A1B0GVQ3 168 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 FBP1P09467 338 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 FXYD4P59646 89 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 NANOS3P60323 173 aaKnown RBP7.77□□□□□ -1.17
UPF2-202ENST00000357604 TFF3Q07654 80 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 TNK1Q13470 666 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 ZMYND11Q15326 602 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 AADACL3Q5VUY0 350 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 SLC35E4Q6ICL7 350 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 NOXA1Q86UR1 476 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 KIR3DL3Q8N743 410 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 CHPT1Q8WUD6 406 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 LINC00312Q9Y6C7 94 aa7.77□□□□□ -1.17
UPF2-202ENST00000357604 ORC5O43913 435 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 ICMTO60725 284 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 INHBBP09529 407 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 ZNF728P0DKX0 622 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 NCS1P62166 190 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 ZNF154Q13106 437 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 SGPP2Q8IWX5 399 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 MRGPRDQ8TDS7 321 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 RASL11BQ9BPW5 248 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 SYNGR1O43759 233 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 GAPDHP04406 335 aaKnown RBP7.76□□□□□ -1.17
UPF2-202ENST00000357604 AMY2AP04746 511 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 HIST1H1DP16402 221 aaKnown RBP7.76□□□□□ -1.17
UPF2-202ENST00000357604 OR10S1Q8NGN2 331 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 BPESC1Q9GZL8 116 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 LIN7CQ9NUP9 197 aaKnown RBP7.76□□□□□ -1.17
UPF2-202ENST00000357604 CDC42EP3Q9UKI2 254 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 L7N2F9 121 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 RAB3DO95716 219 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 FCER2P06734 321 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 FOSL1P15407 271 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 ADRA2CP18825 462 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 COL8A2P25067 703 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 VAMP2P63027 116 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 TRIM16LQ309B1 348 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 ZNF695Q8IW36 515 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 OR4A4PQ8NGN8 299 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 COQ8AQ8NI60 647 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 RBFOX1Q9NWB1 397 aaKnown RBP7.76□□□□□ -1.17
UPF2-202ENST00000357604 RNF150Q9ULK6 438 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 GABARAPO95166 117 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 PRSS12P56730 875 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 CLDN12P56749 244 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 SLC35B1P78383 322 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 HLA-DRB3P79483 266 aa7.76□□□□□ -1.17
UPF2-202ENST00000357604 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms