RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CDH20Q9HBT6 801 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PNO1Q9NRX1 252 aaKnown RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 RCL1Q9Y2P8 373 aaKnown RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TRIOO75962 3097 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 DUXBA0A1W2PPF3 345 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CYB5BO43169 146 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OPN1MWP04001 364 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OR5AC1P0C628 307 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TRGC1P0CF51 173 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OPN1MW2P0DN77 364 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OPN1MW3P0DN78 364 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 ATP6V0CP27449 155 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 GABREP78334 506 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TLE3Q04726 772 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 DPPA2Q7Z7J5 298 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TMEM183AQ8IXX5 376 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 NOXO1Q8NFA2 376 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CLDND2Q8NHS1 167 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 HAS2Q92819 552 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 MVB12AQ96EY5 273 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 Q96M66 194 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 LRRC61Q9BV99 259 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OR8D2Q9GZM6 311 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 PNRC2Q9NPJ4 139 aaKnown RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 AK3Q9UIJ7 227 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 RALGAPA1Q6GYQ0 2036 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 FREM3P0C091 2139 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CCDC187A0A096LP49 1063 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 DHRS7CA6NNS2 312 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 A8MWP6 167 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CLDN34H7C241 214 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CYB5R3P00387 301 aaPredicted RBP9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TRGC2P03986 189 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 GABRR1P24046 479 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 IL2RGP31785 369 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 HHEXQ03014 270 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 OR8B8Q15620 311 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TAF9Q16594 264 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 AKR1C8PQ5T2L2 129 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 SLC25A47Q6Q0C1 308 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 CLEC9AQ6UXN8 241 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TTLL10Q6ZVT0 673 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 ABHD5Q8WTS1 349 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 SPACA5Q96QH8 159 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 HIST1H2BLQ99880 126 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 ADAMTS9Q9P2N4 1935 aa9.28□□□□□ -0.92
CAPN3-205ENST00000357568 TGIF2-C20orf24A0A0A6YYL0 155 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LOC102723971A0A1B0GUV8 181 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LIPT2A6NK58 231 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 PRSS47A8MTI9 375 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 ZNF727A8MUV8 499 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LMO7DNF2Z398 122 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 GCGP01275 180 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 RAB4AP20338 218 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 OR1D4P47884 311 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 NOVA1P51513 510 aaKnown RBP9.27□□□□□ -0.93
CAPN3-205ENST00000357568 OR8G1Q15617 311 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 GALNTL5Q7Z4T8 443 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 MRPL52Q86TS9 123 aaKnown RBP9.27□□□□□ -0.93
CAPN3-205ENST00000357568 PRR22Q8IZ63 422 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 D2HGDHQ8N465 521 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 SAP25Q8TEE9 199 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 DUSP23Q9BVJ7 150 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 PARD6AQ9NPB6 346 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 TMEM9BQ9NQ34 198 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 ZNF701Q9NV72 531 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-205ENST00000357568 MCTS1Q9ULC4 181 aaKnown RBP9.27□□□□□ -0.93
CAPN3-205ENST00000357568 IGKV1D-8A0A087WSZ0 117 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LNP1A1A4G5 178 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 CLEC18AA5D8T8 446 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 H0YL77 283 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 WISP1O95388 367 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 IGHG1P01857 330 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 NHLH2Q02577 135 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 PMS2P11Q13670 270 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 SLC25A53Q5H9E4 307 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LYZL2Q7Z4W2 148 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 COMMD2Q86X83 199 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 CARFQ8N187 725 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 CLEC18CQ8NCF0 446 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LMX1AQ8TE12 382 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 MOB3AQ96BX8 217 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 GAL3ST4Q96RP7 486 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 P2RX4Q99571 388 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 TCEAL2Q9H3H9 227 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-205ENST00000357568 SERINC1Q9NRX5 453 aa9.27□□□□□ -0.93
CAPN3-205ENST00000357568 LYRM2Q9NU23 88 aaPredicted RBP9.27□□□□□ -0.93
CAPN3-205ENST00000357568 PIGBOS1A0A0B4J2F0 54 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 A0A1B0GU03 582 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 PRKNO60260 465 aaPredicted RBP9.26□□□□□ -0.93
CAPN3-205ENST00000357568 NR2C1P13056 603 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 FABP4P15090 132 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 BIDP55957 195 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 NUTF2P61970 127 aaKnown RBP9.26□□□□□ -0.93
CAPN3-205ENST00000357568 CCL20P78556 96 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 HAGHQ16775 308 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 ABLIM2Q6H8Q1 611 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 ZNF343Q6P1L6 599 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 OGFOD3Q6PK18 319 aa9.26□□□□□ -0.93
CAPN3-205ENST00000357568 ASCL5Q7RTU5 278 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms