RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 DDIT4LQ96D03 193 aa7.22□□□□□ -1.25
CDC42SE1-201ENST00000357235 FAAP24Q9BTP7 215 aa7.22□□□□□ -1.25
CDC42SE1-201ENST00000357235 LPAR2Q9HBW0 351 aa7.22□□□□□ -1.25
CDC42SE1-201ENST00000357235 C1orf123Q9NWV4 160 aa7.22□□□□□ -1.25
CDC42SE1-201ENST00000357235 VPS13AQ96RL7 3174 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 JTBO76095 146 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 HPNP05981 417 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 TMEM225BP0DP42 221 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 FOLR1P15328 257 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 GUCA1AP43080 201 aaPredicted RBP7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 ZNF41P51814 821 aaPredicted RBP7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 RAB35Q15286 201 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 HAGHQ16775 308 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 VAX1Q5SQQ9 334 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 OGFOD3Q6PK18 319 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 C20orf196Q8IYI0 205 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 OR1L3Q8NH93 324 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 PRRX2Q99811 253 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 DNAJC4Q9NNZ3 241 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 PLA2G2EQ9NZK7 142 aa7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 NXT1Q9UKK6 140 aaKnown RBP7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 RCL1Q9Y2P8 373 aaKnown RBP7.21□□□□□ -1.25
CDC42SE1-201ENST00000357235 URB1O60287 2271 aaKnown RBP7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 IGKV1-9A0A0C4DH69 117 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 GEMIN2O14893 280 aaKnown RBP7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 ANGPTL7O43827 346 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 TK1P04183 234 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR5AC1P0C628 307 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 KLK2P20151 261 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 OMGP23515 440 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 TAS2R46P59540 309 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 SPEM2Q0P670 501 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 PDCD1Q15116 288 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 SHHQ15465 462 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 IQCJQ1A5X6 159 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 ABCA11PQ4W5N1 156 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 SLC16A14Q7RTX9 510 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 DYRK2Q92630 601 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 RAB39BQ96DA2 213 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 GNRHR2Q96P88 292 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 SCRT1Q9BWW7 348 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 SH3BGRL3Q9H299 93 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 PLEKHA2Q9HB19 425 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 GPR173Q9NS66 373 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 KLHL13Q9P2N7 655 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 SRPK3Q9UPE1 567 aa7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 TNRC18O15417 2968 aaPredicted RBP7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 CHD3Q12873 2000 aaKnown RBP7.21□□□□□ -1.26
CDC42SE1-201ENST00000357235 A0A087WWC5 75 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 IGKV3D-11A0A0A0MRZ8 115 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 A0A1W2PQD3 144 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 DHRS7CA6NNS2 312 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 E9PLN8 166 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 IGHG1P01857 330 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR4A8P0C604 315 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 PGA4P0DJD7 388 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 PGA5P0DJD9 388 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF43P17038 809 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 DRD1P21728 446 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 GABRA4P48169 554 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 PIGPP57054 158 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 C17orf67Q0P5P2 114 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 TAF9Q16594 264 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 LEMD1Q68G75 181 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 BTNL3Q6UXE8 466 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 MEX3BQ6ZN04 569 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 SUMF1Q8NBK3 374 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 OR5L1Q8NGL2 311 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 FAM213BQ8TBF2 198 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 EMG1Q92979 244 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 FAM210BQ96KR6 192 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 CCDC74BQ96LY2 380 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 METTL7AQ9H8H3 244 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF160Q9HCG1 818 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 LUZP4Q9P127 313 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 ABCA7Q8IZY2 2146 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 TRDCB7Z8K6 153 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 HSBP1L1C9JCN9 74 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 H3BQ15 152 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 IGHMP01871 453 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 MBPP02686 304 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 ZNF17P17021 662 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 MRPS21P82921 87 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 HYAL1Q12794 435 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 PCK2Q16822 640 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 RPUSD3Q6P087 351 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 TEX38Q6PEX7 206 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 SMIM15Q7Z3B0 74 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 C1orf147Q96MC9 270 aaPredicted RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 MCTS1Q9ULC4 181 aaKnown RBP7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 PADI1Q9ULC6 663 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 RFNGQ9Y644 331 aa7.2□□□□□ -1.26
CDC42SE1-201ENST00000357235 A0A1W2PPC4 97 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 FAM230AA0A1W2PPH8 454 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 C20orf202A1L168 122 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 LIPT2A6NK58 231 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 CBR3O75828 277 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 NXPH3O95157 252 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 IRF2P14316 349 aa7.19□□□□□ -1.26
CDC42SE1-201ENST00000357235 GALNSP34059 522 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms