RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZNF528Q3MIS6 628 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 KRTCAP3Q53RY4 240 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 TGIF2LYQ8IUE0 185 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 OR4P4Q8NGL7 312 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PLPPR2Q96GM1 343 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 LURAP1Q96LR2 239 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 LINC00052Q96N35 136 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 GHITMQ9H3K2 345 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 NTMQ9P121 344 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PCOLCE2Q9UKZ9 415 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SPAARA0A1B0GVQ0 90 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ARG1P05089 322 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CST2P09228 141 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SLC6A1P30531 599 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CCKARP32238 428 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CD80P33681 288 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 AGERQ15109 404 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF79Q15937 498 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 AANATQ16613 207 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 IQCJQ1A5X6 159 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ANKRD55Q3KP44 614 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 FHL5Q5TD97 284 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 RHBDD2Q6NTF9 364 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 Q8WTZ3 238 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 RAX2Q96IS3 184 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SEC11CQ9BY50 192 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 TMPRSS13Q9BYE2 586 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CIDEAO60543 219 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 IGHA1P01876 353 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 IGHA2P01877 340 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM215Q68D42 235 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CD300LDQ6UXZ3 194 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 LIPGQ9Y5X9 500 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 KCNE1BA0A087WTH5 132 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 SLC17A2O00624 439 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CD40P25942 277 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PSMB2P49721 201 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CTAG1AP78358 180 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 TFF2Q03403 129 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 PLA2G2FQ9BZM2 168 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 CACNG5Q9UF02 275 aa4.91□□□□□ -1.62
PTPRD-202ENST00000356435 ERRFI1Q9UJM3 462 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-202ENST00000356435 IGHV5-51A0A0C4DH38 117 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 C5orf52A6NGY3 159 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PPM1DO15297 605 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 STAG3L2P0CL84 134 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 HIST1H1DP16402 221 aaKnown RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PMELP40967 661 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PWWP2BQ6NUJ5 590 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 TBC1D26Q86UD7 250 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 NFAM1Q8NET5 270 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 VAMP8Q9BV40 100 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 WDR54Q9H977 334 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 ASCL3Q9NQ33 180 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PDE4DIPQ5VU43 2346 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 FAM181BA6NEQ2 426 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PDCD6O75340 191 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 SFTA3P0C7M3 94 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 CD96P40200 585 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 OR3A1P47881 315 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 FMODQ06828 376 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 GGTLC2Q14390 218 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 KISS1Q15726 138 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PRSS36Q5K4E3 855 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 BAP18Q8IXM2 172 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 SCMH1Q96GD3 660 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 LOXL4Q96JB6 756 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 P2RX4Q99571 388 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 CCL19Q99731 98 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 IL21Q9HBE4 155 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 MANBALQ9NQG1 85 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 RER1O15258 196 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 BCL3P20749 454 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 LOXL3P58215 753 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 YBX1P67809 324 aaKnown RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 PLAURQ03405 335 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 DCAF10Q5QP82 559 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 AMMECR1LQ6DCA0 310 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF429Q86V71 674 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 OR1L6Q8NGR2 347 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 RFESDQ8TAC1 157 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 SMIM4Q8WVI0 70 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 CNRIP1Q96F85 164 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 MRPL37Q9BZE1 423 aaKnown RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 WDR13Q9H1Z4 485 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 ZNF768Q9H5H4 540 aaKnown RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM167BQ9NRX6 74 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 LYRM2Q9NU23 88 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-202ENST00000356435 CCL27Q9Y4X3 112 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 ITGB4P16144 1822 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 TMEM272A0A1B0GTI8 110 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 IFNL4K9M1U5 179 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 B4GALT3O60512 393 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 NKX2-2O95096 273 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 ERVFRD-1P60508 538 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 MOGAT2Q3SYC2 334 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 C10orf113Q5VZT2 155 aa4.9□□□□□ -1.62
PTPRD-202ENST00000356435 FAAP20Q6NZ36 180 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms