RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 SHISA7A6NL88 538 aa16.44■□□□□ 0.22
PRPF39-201ENST00000355765 PROB1E7EW31 1015 aa16.44■□□□□ 0.22
PRPF39-201ENST00000355765 SFTPCP11686 197 aa16.44■□□□□ 0.22
PRPF39-201ENST00000355765 ZNF25P17030 456 aaPredicted RBP16.44■□□□□ 0.22
PRPF39-201ENST00000355765 HNRNPA2B1P22626 353 aaKnown RBP16.44■□□□□ 0.22
PRPF39-201ENST00000355765 TMEM252Q8N6L7 170 aa16.44■□□□□ 0.22
PRPF39-201ENST00000355765 OIT3Q8WWZ8 545 aa16.44■□□□□ 0.22
PRPF39-201ENST00000355765 SERINC1Q9NRX5 453 aa16.44■□□□□ 0.22
PRPF39-201ENST00000355765 A0A1W2PQD3 144 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 FOXL2P58012 376 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 RELQ04864 619 aaPredicted RBP16.43■□□□□ 0.22
PRPF39-201ENST00000355765 CXorf66Q5JRM2 361 aaPredicted RBP16.43■□□□□ 0.22
PRPF39-201ENST00000355765 FAM180AQ6UWF9 173 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 RPP25Q9BUL9 199 aaKnown RBP16.43■□□□□ 0.22
PRPF39-201ENST00000355765 TCFL5Q9UL49 500 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 EYSQ5T1H1 3165 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 LOC102723971A0A1B0GUV8 181 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 XKRY2A2RUG3 117 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 CYB5R3P00387 301 aaPredicted RBP16.43■□□□□ 0.22
PRPF39-201ENST00000355765 NKX2-1P43699 371 aaPredicted RBP16.43■□□□□ 0.22
PRPF39-201ENST00000355765 RND2P52198 227 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 PRSS12P56730 875 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 H3F3AP84243 136 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 ZP4Q12836 540 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 RTL10Q7L3V2 364 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 BEND2Q8NDZ0 799 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 WFIKKN1Q96NZ8 548 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 TM2D1Q9BX74 207 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 WWTR1Q9GZV5 400 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 NKX2-4Q9H2Z4 354 aa16.43■□□□□ 0.22
PRPF39-201ENST00000355765 F5H5K5 113 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 HOXB2P14652 356 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 TLE1Q04724 770 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 ZFP36L1Q07352 338 aaKnown RBP16.42■□□□□ 0.22
PRPF39-201ENST00000355765 FOXF1Q12946 379 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 ZNF154Q13106 437 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 OR8G5Q8NG78 346 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 ACTR3CQ9C0K3 210 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-201ENST00000355765 ZNF665Q9H7R5 613 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 LRFN1Q9P244 771 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 DKKL1Q9UK85 242 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 NCOA6Q14686 2063 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-201ENST00000355765 SPRY1O43609 319 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-201ENST00000355765 CTSEP14091 401 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 AKT2P31751 481 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 FGF8P55075 233 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-201ENST00000355765 VAMP2P63027 116 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 PDCD1Q15116 288 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 LRTM2Q8N967 370 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 OR10A7Q8NGE5 316 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 THAP3Q8WTV1 239 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-201ENST00000355765 HIST1H2AAQ96QV6 131 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 CDH20Q9HBT6 801 aa16.42■□□□□ 0.22
PRPF39-201ENST00000355765 TNFP01375 233 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 SMAD4Q13485 552 aaKnown RBP16.41■□□□□ 0.22
PRPF39-201ENST00000355765 SP5Q6BEB4 398 aaPredicted RBP16.41■□□□□ 0.22
PRPF39-201ENST00000355765 SLC22A18ASQ8N1D0 253 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 PNRC2Q9NPJ4 139 aaKnown RBP16.41■□□□□ 0.22
PRPF39-201ENST00000355765 B4DEV8 164 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 TNFRSF10CO14798 259 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 DFFBO76075 338 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 MBP02144 154 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 CLN3Q13286 438 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 ARL6IP1Q15041 203 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 LCN15Q6UWW0 184 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 ODF3L1Q8IXM7 274 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 RBMXL1Q96E39 390 aaKnown RBP16.41■□□□□ 0.22
PRPF39-201ENST00000355765 METTL9Q9H1A3 318 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 PLEKHF2Q9H8W4 249 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 B3GAT1Q9P2W7 334 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 PIGLQ9Y2B2 252 aa16.41■□□□□ 0.22
PRPF39-201ENST00000355765 A0A1W2PQF6 199 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 TMEM50AO95807 157 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 HLA-HP01893 362 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 CCL1P22362 96 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 NTSR1P30989 418 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 TLE4Q04727 773 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 LRP11Q86VZ4 500 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 D2HGDHQ8N465 521 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 RNASEH2CQ8TDP1 164 aaKnown RBP16.4■□□□□ 0.22
PRPF39-201ENST00000355765 Q96M66 194 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 C11orf1Q9H5F2 150 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 LAMP3Q9UQV4 416 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 CA3P07451 260 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 GALNSP34059 522 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 ERVS71-1P61550 626 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 C1orf189Q5VU69 101 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 MRPL13Q9BYD1 178 aaKnown RBP16.4■□□□□ 0.22
PRPF39-201ENST00000355765 GPR173Q9NS66 373 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 TRBV24-1A0A075B6N3 115 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 KIR2DS5A0A0G2JLQ3 304 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 A0A0G2JNG1 304 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 KIR2DS3K7RE56 304 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 KIR2DS5Q14953 304 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 FAM131CQ96AQ9 280 aa16.4■□□□□ 0.22
PRPF39-201ENST00000355765 H3BP45 60 aa16.39■□□□□ 0.21
PRPF39-201ENST00000355765 GFERP55789 205 aa16.39■□□□□ 0.21
PRPF39-201ENST00000355765 NSDHLQ15738 373 aa16.39■□□□□ 0.21
PRPF39-201ENST00000355765 THEM4Q5T1C6 240 aa16.39■□□□□ 0.21
PRPF39-201ENST00000355765 TEX38Q6PEX7 206 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms