RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TPPP2P59282 170 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 HLXQ14774 488 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-202ENST00000355133 CLEC9AQ6UXN8 241 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 TBC1D26Q86UD7 250 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 ZNF561Q8N587 486 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 ZNF737O75373 536 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 MMP7P09237 267 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-202ENST00000355133 FOXL2P58012 376 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 SLC25A30Q5SVS4 291 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 OR52L2PQ8NGH6 319 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 TUBAL3A6NHL2 446 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 SNCGO76070 127 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 CST2P09228 141 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 CDC34P49427 236 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-202ENST00000355133 OR10G4Q8NGN3 311 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 OR10G9Q8NGN4 311 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 OR10G7Q8NGN6 311 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 R3HDM4Q96D70 268 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 NTMQ9P121 344 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 F5P12259 2224 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 C5orf67F2Z3F1 127 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 SOCS1O15524 211 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 GALR1P47211 349 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 LGALS7P47929 136 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 ZBTB37Q5TC79 503 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 MRM1Q6IN84 353 aaKnown RBP11.65□□□□□ -0.54
SCN8A-202ENST00000355133 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 OR2C3Q8N628 320 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 OR4S2Q8NH73 311 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 TMEM37Q8WXS4 190 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 DUSP15Q9H1R2 295 aaPredicted RBP11.65□□□□□ -0.54
SCN8A-202ENST00000355133 GPR35Q9HC97 309 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 FRRS1LQ9P0K9 344 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 NAT8BQ9UHF3 227 aa11.65□□□□□ -0.54
SCN8A-202ENST00000355133 IGHV3OR15-7A0A075B7D8 119 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 TRDCB7Z8K6 153 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 OR2H1Q9GZK4 316 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 WSB1Q9Y6I7 421 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 CSF2RBP32927 897 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
SCN8A-202ENST00000355133 MAP6Q96JE9 813 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 LPAR2Q9HBW0 351 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 A0A1W2PPV9 198 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 MPC2O95563 127 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 NQO2P16083 231 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 OOEPA6NGQ2 149 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 ZNF716A6NP11 495 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 DCAF10Q5QP82 559 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 RNF7Q9UBF6 113 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 STARD10Q9Y365 291 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 A0A1W2PNV4 684 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 PMELP40967 661 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 LSM6P62312 80 aaKnown RBP11.64□□□□□ -0.55
SCN8A-202ENST00000355133 SLC52A3Q9NQ40 469 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 MMP26Q9NRE1 261 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 KIAA1551Q9HCM1 1747 aa11.64□□□□□ -0.55
SCN8A-202ENST00000355133 BRWD1Q9NSI6 2320 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 J3KRW8 73 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 ADAP1O75689 374 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 BRS3P32247 399 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 RPL13AP40429 203 aaKnown RBP11.63□□□□□ -0.55
SCN8A-202ENST00000355133 WDFY2Q96P53 400 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 RASL11BQ9BPW5 248 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 FFAR1O14842 300 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 TO15178 435 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 APELAP0DMC3 54 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 VAMP3Q15836 100 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 TMEM241Q24JQ0 296 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 DMKNQ6E0U4 476 aaPredicted RBP11.63□□□□□ -0.55
SCN8A-202ENST00000355133 ZNF66Q6ZN08 573 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 C9orf40Q8IXQ3 194 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 NXF2Q9GZY0 626 aaKnown RBP11.63□□□□□ -0.55
SCN8A-202ENST00000355133 DYNLT3P51808 116 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 SPICQ8N5J4 248 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 SLC25A40Q8TBP6 338 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 CACNA1CQ13936 2221 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 TRAV39A0A0B4J263 110 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 ANKRD20A5PA0PJZ0 165 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 IL13RA2Q14627 380 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 OR2M3Q8NG83 312 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 SH2D2AQ9NP31 389 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 FBXL17Q9UF56 701 aa11.63□□□□□ -0.55
SCN8A-202ENST00000355133 KIAA1324LA8MWY0 1029 aaPredicted RBP11.62□□□□□ -0.55
SCN8A-202ENST00000355133 CCL21O00585 134 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 GATCO43716 136 aaKnown RBP11.62□□□□□ -0.55
SCN8A-202ENST00000355133 SCAND1P57086 179 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 ABHD1Q96SE0 405 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 NEURL1O76050 574 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 HTN1P15515 57 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 PEBP1P30086 187 aaKnown RBP11.62□□□□□ -0.55
SCN8A-202ENST00000355133 HOXC8P31273 242 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 C21orf58P58505 322 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 COL19A1Q14993 1142 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 ADTRPQ96IZ2 230 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 A0A1W2PQF6 199 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 PHOX2AO14813 284 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 LIFP15018 202 aa11.62□□□□□ -0.55
SCN8A-202ENST00000355133 CD200P41217 278 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms